G2059402


Basic Information

Item Value
gene id G2059402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 18532495 ~ 18600174 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2355230
ggcaaggctatcaaatactaattgagtgtatgttaactcctgacccactgggaatgtgatgaaagaaataaaagctgaaataaatcactctactattattctgacatttcacattcttaaaataaagtggtgatcctgacctaaaacagggcatttttacttgggttaaatgtgaggaattgtgaaaagctgaaataaatcattctctctactattattctgacatttcacattcttcaaataaagtgacctaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2355230 True 257 lncRNA 0.33 2 18532495 18600174

Neighbor

gene id symbol gene type direction distance location
LOC118944759 NA coding upstream 153981 18369263 ~ 18378985 (+)
brip1 brip1 coding upstream 289269 18200796 ~ 18243226 (+)
LOC110507666 LOC106581002 coding upstream 718000 17786275 ~ 17814495 (+)
LOC110507114 LOC106581006 coding upstream 752104 17670454 ~ 17780391 (+)
si:dkey-56d12.4 NA coding upstream 1048366 17481701 ~ 17484129 (+)
LOC110507678 LOC106612861 coding downstream 147021 18747195 ~ 18770034 (+)
LOC110507679 ripl1 coding downstream 170652 18770826 ~ 18789238 (+)
LOC110507680 LOC106581030 coding downstream 189378 18789552 ~ 18796852 (+)
sarm1 LOC106612856 coding downstream 204996 18805170 ~ 18820231 (+)
LOC110507684 LOC106581033 coding downstream 238058 18838232 ~ 18849272 (+)
G2059380 NA non-coding upstream 22566 18508219 ~ 18509929 (+)
G2059292 NA non-coding upstream 152785 18379063 ~ 18379710 (+)
G2059153 NA non-coding upstream 271854 18260387 ~ 18260641 (+)
G2059152 NA non-coding upstream 272446 18259831 ~ 18260049 (+)
G2059594 NA non-coding downstream 253392 18853566 ~ 18855198 (+)
G2059610 NA non-coding downstream 322912 18923086 ~ 18923594 (+)
G2059661 NA non-coding downstream 366148 18966322 ~ 18966840 (+)
LOC110507689 LOC106581036 non-coding downstream 389107 18956560 ~ 18991625 (+)
G2059717 NA non-coding downstream 493908 19094082 ~ 19094319 (+)
G2057945 NA other upstream 656663 17873801 ~ 17875832 (+)
G2057804 NA other upstream 946571 17583970 ~ 17585924 (+)
G2057788 NA other upstream 966111 17555504 ~ 17566384 (+)
G2057561 NA other upstream 1315952 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 2122126 16391021 ~ 16410705 (+)
G2059714 NA other downstream 491773 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 593283 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 1458069 20058224 ~ 20059968 (+)
G2061226 NA other downstream 1705208 20305382 ~ 20306608 (+)
LOC110507744 p4ha3 other downstream 2104755 20697519 ~ 20708634 (+)

Expression


Co-expression Network