G2059594


Basic Information

Item Value
gene id G2059594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 18853566 ~ 18855198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2355447
gggccgaatactttcgcaaggcactgtattttttttacatctgtTCCCCccatttcgtggtatccaattggtagttacagtcttgtctcatcgcttcaactcgggagaggcgaaggtcgagagccatgtgtcctccgaaacacaaccaaaccaagccacttcttgacacaatgccctcttaacccggaagccagccgcaccaatgtgacgaaggaaacactgtacacctggcgaccgtatCAGCGTGcttgcacccggcccgccacaggactCGCTACGCACACAACCCTACGCAAACAGCcaatacaacgcaggagtggcttcggtacaagtctctgaatgtccttgaggggcccagccagagcccagacttgaacccgatcgaacatctctggagagacctgacaatagctgtgcagcaacgttccccatccaaccttacagaacttgagaggatctgcagagaagaatgggagaaactccccaaatgcaggtgtgccaagcttgtagcgtcatacccaagaagactcaaggctgtaatcgctgccaaagagtgtagtaagttttaagttcctcggcgtacacatcacagacacactgaattggtccacccacacagacagcatcgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgtcgggctgtatcaccgcctggtacggcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgcactccaggacacctacaccacccgatgtcacaggaaggccataaagatcatcaaggacaacaaccacccga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2355447 True 913 lncRNA 0.53 2 18853566 18855198

Neighbor

gene id symbol gene type direction distance location
LOC110507684 LOC106581033 coding upstream 4294 18838232 ~ 18849272 (+)
sarm1 LOC106612856 coding upstream 33335 18805170 ~ 18820231 (+)
LOC110507680 LOC106581030 coding upstream 56714 18789552 ~ 18796852 (+)
LOC110507679 ripl1 coding upstream 64328 18770826 ~ 18789238 (+)
LOC110507678 LOC106612861 coding upstream 83532 18747195 ~ 18770034 (+)
LOC110507685 LOC106581023 coding downstream 6625 18861823 ~ 18884306 (+)
LOC110507687 LOC106612851 coding downstream 80343 18935541 ~ 18940039 (+)
LOC110507689 LOC106581036 coding downstream 101362 18956560 ~ 18991625 (+)
LOC110507690 gosr1 coding downstream 137076 18992274 ~ 19047785 (+)
LOC110507699 LOC106581044 coding downstream 493572 19348770 ~ 19383505 (+)
G2059402 NA non-coding upstream 253392 18532495 ~ 18600174 (+)
G2059416 NA non-coding upstream 301958 18549765 ~ 18551608 (+)
G2059380 NA non-coding upstream 343637 18508219 ~ 18509929 (+)
G2059292 NA non-coding upstream 473856 18379063 ~ 18379710 (+)
LOC118944759 NA non-coding upstream 474581 18369263 ~ 18378985 (+)
G2059610 NA non-coding downstream 67888 18923086 ~ 18923594 (+)
G2059661 NA non-coding downstream 111124 18966322 ~ 18966840 (+)
G2059717 NA non-coding downstream 238884 19094082 ~ 19094319 (+)
G2059719 NA non-coding downstream 240500 19095698 ~ 19095944 (+)
G2059435 NA other upstream 258724 18571099 ~ 18594842 (+)
G2057945 NA other upstream 977734 17873801 ~ 17875832 (+)
G2057804 NA other upstream 1267642 17583970 ~ 17585924 (+)
G2057788 NA other upstream 1287182 17555504 ~ 17566384 (+)
G2057561 NA other upstream 1637023 17213110 ~ 17219017 (+)
G2059714 NA other downstream 236749 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 338259 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 1203045 20058224 ~ 20059968 (+)
G2061226 NA other downstream 1450184 20305382 ~ 20306608 (+)
LOC110507744 p4ha3 other downstream 1849731 20697519 ~ 20708634 (+)

Expression


Co-expression Network