G2059661


Basic Information

Item Value
gene id G2059661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 18966322 ~ 18966840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2355526
CAACTAAATGGTCCTGATCTTATAGGGCTAGGTCATATCCAAAACAACTAAATGGTCCTGATCTTATAGGGCTAGGTCATATCCAAAACAACTAAATGGTCCTGATCTTATAGGGCTAGGCCATATCCAAAACAACTAAATGGTCCTGATCTTATAGGGCTAGGCCATATCCAAAACAACTAAATGGTCCTGATCTTATAGGGCTAGGTCATATCCAAAACAACTAAATGGTCCTGATCATATAGGGCTAGGTCATATCCAAAACAACTAAATGGTCCTGATCTTATAGGGCTAGGCCATATCCAAAACAACTAACACACTGAAttcatacatttacatttttattgtgAAGTCATGTATTTCTACTCCAACTAATTTGACTAATCTGGGAGGTGAAGTCATTACAGTATtaaataatttggtctattttggATGGAATCAAGGCATTAGAATGTACCAGAGGCCAACAAAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2355526 True 475 lncRNA 0.37 2 18966322 18966840

Neighbor

gene id symbol gene type direction distance location
LOC110507687 LOC106612851 coding upstream 26283 18935541 ~ 18940039 (+)
LOC110507685 LOC106581023 coding upstream 82016 18861823 ~ 18884306 (+)
LOC110507684 LOC106581033 coding upstream 117050 18838232 ~ 18849272 (+)
sarm1 LOC106612856 coding upstream 146091 18805170 ~ 18820231 (+)
LOC110507680 LOC106581030 coding upstream 169470 18789552 ~ 18796852 (+)
LOC110507690 gosr1 coding downstream 25434 18992274 ~ 19047785 (+)
LOC110507699 LOC106581044 coding downstream 381930 19348770 ~ 19383505 (+)
LOC110507698 LOC106581045 coding downstream 426777 19393617 ~ 19407557 (+)
LOC110507701 LOC106581046 coding downstream 445831 19412671 ~ 19439667 (+)
LOC110507703 LOC106581047 coding downstream 473180 19440020 ~ 19502535 (+)
G2059610 NA non-coding upstream 42728 18923086 ~ 18923594 (+)
G2059594 NA non-coding upstream 111124 18853566 ~ 18855198 (+)
G2059402 NA non-coding upstream 366148 18532495 ~ 18600174 (+)
G2059416 NA non-coding upstream 414714 18549765 ~ 18551608 (+)
G2059380 NA non-coding upstream 456393 18508219 ~ 18509929 (+)
LOC110507689 LOC106581036 non-coding downstream 22441 18956560 ~ 18991625 (+)
G2059717 NA non-coding downstream 127242 19094082 ~ 19094319 (+)
G2059719 NA non-coding downstream 128858 19095698 ~ 19095944 (+)
G2059722 NA non-coding downstream 131649 19098489 ~ 19099017 (+)
G2059723 NA non-coding downstream 137922 19104762 ~ 19104971 (+)
G2059435 NA other upstream 371480 18571099 ~ 18594842 (+)
G2057945 NA other upstream 1090490 17873801 ~ 17875832 (+)
G2057804 NA other upstream 1380398 17583970 ~ 17585924 (+)
G2057788 NA other upstream 1399938 17555504 ~ 17566384 (+)
G2057561 NA other upstream 1749779 17213110 ~ 17219017 (+)
G2059714 NA other downstream 125107 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 226617 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 1091403 20058224 ~ 20059968 (+)
G2061226 NA other downstream 1338542 20305382 ~ 20306608 (+)
LOC110507744 p4ha3 other downstream 1738089 20697519 ~ 20708634 (+)

Expression


Co-expression Network