G2061795


Basic Information

Item Value
gene id G2061795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 20123080 ~ 20123789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2357944
ATTTTGATGTCCACTCTTGCTGGAACACCCAACATTCATCGTCTACTTTCCTTTTCTTCGAAAAAAAATTTTTTGCGCAATTTGTGACATGcgtgtcagcctgtcagtcactctCTGTGCTCGTGCAGTTGTGATTTATAagagccttcaaaataaaatgtcccacaagcggtgggagttaaatcattacacaaaggcaagtattcattgggcttttaatttgaataacaaatacgTTTTTCTATTTTACTATTGCAAATTCTTTGTGAGCTGAGCATGATTCCACGGGTCATATTGAATCAGGTTGCGGGCCGCATACGGGCTGGCCTTTGACCAGGCCTGGCGTAGACCAATTACAGTTTCCAATCTCTTCAAAATAATgtgtgtaagggttttcctgtggtgaagtagaggcggaccaaaacgcagcgtggttatattgattcatgtttaatgaaaaaacgataaacacgaacactacaaaacaataaacgtggaaaaccaaaaacagccctatctggtgcaaaacacagagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaatatagaaatacccaaatcatagaaaaacaaacatagactgcccacccaactcacgccctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2357944 True 710 lncRNA 0.41 1 20123080 20123789
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110507728 LOC106581067 coding downstream 40019 20077668 ~ 20083061 (-)
LOC110507721 LOC106581060 coding downstream 74956 20046750 ~ 20048124 (-)
LOC110507720 LOC106581059 coding downstream 77885 20043471 ~ 20045195 (-)
LOC110507719 LOC106581058 coding downstream 80648 20040304 ~ 20042432 (-)
LOC110507717 NA coding downstream 114035 20003826 ~ 20009045 (-)
galnt17 LOC106581212 coding upstream 183814 20307603 ~ 20323469 (-)
LOC110507735 NA coding upstream 293289 20417078 ~ 20426186 (-)
LOC110507121 dnhd1 coding upstream 346563 20470352 ~ 20518901 (-)
si:ch211-149e23.4 LOC106581205 coding upstream 396984 20520773 ~ 20626494 (-)
diabloa LOC106581203 coding upstream 526090 20649879 ~ 20652780 (-)
G2061790 NA non-coding downstream 5127 20117742 ~ 20117953 (-)
G2061784 NA non-coding downstream 10838 20112001 ~ 20112242 (-)
G2061782 NA non-coding downstream 12108 20110429 ~ 20110972 (-)
G2061769 NA non-coding downstream 27787 20095087 ~ 20095293 (-)
G2061767 NA non-coding downstream 30276 20092600 ~ 20092804 (-)
G2061805 NA non-coding upstream 15233 20139022 ~ 20139275 (-)
G2061897 NA non-coding upstream 176978 20300767 ~ 20306644 (-)
G2061929 NA non-coding upstream 217953 20341742 ~ 20347806 (-)
G2061976 LOC106581210 non-coding upstream 272264 20396053 ~ 20398321 (-)
G2061974 NA non-coding upstream 306611 20430400 ~ 20454648 (-)
G2058724 NA other downstream 2200328 17922342 ~ 17922752 (-)
LOC110507661 LOC106581010 other downstream 2653259 17464437 ~ 17481646 (-)
LOC110507646 LOC106612894 other downstream 3123295 16756597 ~ 17064214 (-)
G2056115 NA other downstream 4746565 15376215 ~ 15376515 (-)
LOC110507082 LOC106580920 other downstream 5587840 14532256 ~ 14719525 (-)
LOC110507754 LOC106581192 other upstream 790325 20913520 ~ 20924130 (-)
LOC110507765 dynll2a other upstream 1146378 21270167 ~ 21273576 (-)
LOC110507126 kiaa0100 other upstream 1173876 21295518 ~ 21311437 (-)
LOC110507789 LOC106581159 other upstream 2588874 22712654 ~ 22718153 (-)
zbtb16b LOC106581153 other upstream 2680469 22780311 ~ 22808183 (-)

Expression

G2061795 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G2061795 Expression in each Bioproject

Bar chart with 20 bars.
G2061795 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network