G2061226


Basic Information

Item Value
gene id G2061226
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 20305382 ~ 20306608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2357309
cagttaaTCTTTGCCAtgatcctgactagactcccagtccctgccgctccagtccctccccacagcatgatgctgccaccaccatgcttcaccatagggatggtgccaggtttcctccagatatgatgcctggcattcaggccaaagagttcaaccttggtttcatccgaccagagaatcttgtttctcatggtctgagtcctttaggtgccttttggcaaactccaagcgggatgtcatgtgccttttacggaggagtggcttccgtctggccactctaccataaaggcctgattggtagagtgctgcagagatggttgtccttctggaaggttctcctatctccacaggggagctctagagctctgtcagagttccctgaccaaggtcttcttccttgattgctcagtttgaccgggcggacagctctaggaagagtcttggtggttgcaaactgatggaggccacagtgttcttggggaccttcaatgctgcagacattttttggtatccttcaccagatctgtgcctcgacacaattctgtctcagagctctacagacaattccttcgacctccagGCTTGTTGTTTTTtctatgacatgcactgtcaactgtgggaccttatatagacagatgtgtgcctttccaaatcacgtccaatcaattgaattcaccacaggttgactccaatcaagttgtagaaacatctcaaggatgatcaaacaGGGGTGTacctgatctcaatttcaagtctcatagcaaggggtctgaatacttatgtaaataagatatttcaggtttttatttttaatacatttacaaacatttctaaaaacctgttttcactttgtcattatggggtattgtgtttagattgctaAGGATTTgtatgtatttaatcaattttagaataaggctgtaacgtaacaaaattaggaaaaagtcaagggttctgattactttccgaaggcactgtatgtgctgtaTGGACACTGTAcataaaatacatatatatatatatatatatacagtacatacacttaCACATGTAAACTTTTCATGCACATCATTAAAACATGTAGGGGtagtttcccggacacagattaagccttgtGCTGGACTAAAAAGCAAGATCAATGGAAAATCTCtattgaaagtgctttttagtccagatTTAAGTTAATATTAAGAATAGCCTGAATATTGTCTATGTAAATATTAAaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2357309 True 1227 TUCP 0.42 1 20305382 20306608

Neighbor

gene id symbol gene type direction distance location
LOC110507730 LOC106581213 coding upstream 3567 20194684 ~ 20301815 (+)
tyw1 LOC105029063 coding upstream 149137 20083569 ~ 20156245 (+)
LOC110507119 LOC106612920 coding upstream 228893 20075573 ~ 20076489 (+)
cldnj LOC106581063 coding upstream 230215 20053334 ~ 20075167 (+)
LOC110507727 NA coding upstream 234851 20067991 ~ 20070531 (+)
flot2b LOC106581211 coding downstream 46739 20353347 ~ 20389568 (+)
LOC110507734 LOC106581210 coding downstream 86932 20393540 ~ 20400243 (+)
LOC110507737 LOC106581089 coding downstream 119722 20426330 ~ 20446903 (+)
dhx40 dhx40 coding downstream 146529 20453137 ~ 20465432 (+)
rrp8 LOC106581208 coding downstream 158914 20465522 ~ 20470291 (+)
G2061191 NA non-coding upstream 179941 20125138 ~ 20125441 (+)
G2061178 NA non-coding upstream 193127 20111956 ~ 20112255 (+)
G2061167 NA non-coding upstream 209623 20095560 ~ 20095759 (+)
G2061165 NA non-coding upstream 218593 20086396 ~ 20086789 (+)
G2061141 LOC106581067 non-coding upstream 222358 20040315 ~ 20083024 (+)
G2061229 NA non-coding downstream 123 20306731 ~ 20306831 (+)
G2061310 NA non-coding downstream 30144 20336752 ~ 20336957 (+)
G2061323 NA non-coding downstream 32602 20339210 ~ 20339466 (+)
G2061325 LOC106586027 non-coding downstream 35087 20341695 ~ 20367442 (+)
G2061355 NA non-coding downstream 150530 20457138 ~ 20457700 (+)
LOC110507725 LOC106581066 other upstream 245414 20058224 ~ 20059968 (+)
G2059777 LOC106581039 other upstream 1110198 19193457 ~ 19195184 (+)
G2059714 NA other upstream 1213110 19091947 ~ 19092272 (+)
G2059435 NA other upstream 1710540 18571099 ~ 18594842 (+)
G2057945 NA other upstream 2429550 17873801 ~ 17875832 (+)
LOC110507744 p4ha3 other downstream 398321 20697519 ~ 20708634 (+)
G2062402 NA other downstream 838603 21145211 ~ 21146366 (+)
G2062531 NA other downstream 973552 21280160 ~ 21281860 (+)
LOC110507128 LOC106581176 other downstream 1116104 21420062 ~ 21437148 (+)
G2062912 LOC106612935 other downstream 1391462 21698070 ~ 21720726 (+)

Expression


Co-expression Network