G2066101


Basic Information

Item Value
gene id G2066101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 23769143 ~ 23771981 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2362719
caagtgatgccacctcTCATTTgacatcaacagtcacttcaagtgatgccacctcTCCCTCGACATCAACAGTATtttcaagtgatgccaccactcCCTCGACATTAAAAGTCACTTCAAGTAATGCCACGTCTACCTCgacatcaacagtcacttcaagtgatgccaccaacACATTGACAGTCTCTACAAGTGATGCCTCCACTCCTTCGActtcaacagtcacttcaagtgatgcaaccactacatcaacagtcacttcaaggtATGCTACCACTACATCGACAGTCCCTTCAAGTGATCCCACCACTTCCTCGACATTAACAGTCACTTCAAGAAATGCCACCTCTCCCTCgacatcaacagtcacttcaagtgatgctaCCACTACATtgacagtcacttcaagtgatgctaCCACTACATTGACAGTctcttcaagtgatgccaccactccctcaacatcaacagtcacttcaagtgatgcaaCCTCTACCTCAACTACATCTACAGTCACACCAAGTAATGCCACCTCTAAGTCAACATCAACAGTCAGTTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2362719 True 562 lncRNA 0.46 3 23769143 23771981

Neighbor

gene id symbol gene type direction distance location
LOC110507812 LOC106581137 coding downstream 27804 23737154 ~ 23741339 (-)
trnap-agg-156 NA coding downstream 61635 23707437 ~ 23707508 (-)
picalmb LOC106581143 coding downstream 199932 23547573 ~ 23569211 (-)
sytl2b LOC106581144 coding downstream 222777 23524663 ~ 23546366 (-)
hspa8b hsp7c coding downstream 255737 23503309 ~ 23513406 (-)
LOC118944644 NA coding upstream 6008 23777989 ~ 23787190 (-)
LOC118944716 NA coding upstream 38416 23810397 ~ 23813666 (-)
LOC110507820 LOC106581132 coding upstream 65301 23837282 ~ 23869548 (-)
LOC110507821 LOC106581130 coding upstream 103354 23875335 ~ 23885622 (-)
vmp1 tmm49 coding upstream 118297 23890278 ~ 23907734 (-)
G2065422 NA non-coding downstream 72977 23692593 ~ 23696166 (-)
G2065311 NA non-coding downstream 266299 23501921 ~ 23502844 (-)
G2065241 NA non-coding downstream 353667 23415110 ~ 23415476 (-)
G2065156 NA non-coding downstream 427071 23327157 ~ 23342072 (-)
G2066157 NA non-coding upstream 138018 23909999 ~ 23910208 (-)
G2066175 NA non-coding upstream 164859 23936840 ~ 23938765 (-)
G2066171 NA non-coding upstream 171531 23943512 ~ 23943865 (-)
G2066336 NA non-coding upstream 407251 24179232 ~ 24179834 (-)
G2066383 NA non-coding upstream 475081 24247062 ~ 24247264 (-)
G2066096 LOC106581136 other downstream 3664 23763699 ~ 23765479 (-)
G2065425 NA other downstream 63178 23703163 ~ 23705965 (-)
zbtb16b LOC106581153 other downstream 961037 22780311 ~ 22808183 (-)
LOC110507789 LOC106581159 other downstream 1051037 22712654 ~ 22718153 (-)
LOC110507126 kiaa0100 other downstream 2465015 21295518 ~ 21311437 (-)
G2066126 LOC106581133 other upstream 35757 23807738 ~ 23808909 (-)
pcp4b NA other upstream 364196 24136177 ~ 24181998 (-)
G2068043 NA other upstream 2046658 25818639 ~ 25834101 (-)
G2068676 NA other upstream 2553149 26325130 ~ 26325479 (-)
LOC110507885 LOC106581250 other upstream 3577992 27333102 ~ 27404380 (-)

Expression


Co-expression Network