G2070354


Basic Information

Item Value
gene id G2070354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 27833893 ~ 27921841 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2367304
gaatacggtgattgacagagtcgaaatccttggccagatcaatgaatacggctgcacagtaatgtttcttatcgatggcggttaagatatcgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatggtgagattcaaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttgggtctagagtgtccccccctttgaagagggggatgaccgcagctgctttccaatctttgggaatctcagacgacacgaaagagaggttgaacaggctagtaataggggtggcaacaatttcggcagataattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctctttcagaacatcagctgaatggatttgggagaaggagaaatggggaaggcttgggcgagttgctgttgggggcgcagtgctgttgacaggggtaggagtagccaggtggaaagcatggccagcagtagaaaaatgcttattgaaattttcaattatggtggatttatcagtggtgacagtgtttcctatcttcagtgcagtgggcagctgggaggaggtgttcttattctccatggactttacagtgtcccagaacttttttgagttagtgttgcaagaagcaaatttctgcttgaaaaagctagccttggcttttctaactgcctgtgtataatggtttctagcttccctgaacagctgcatatcacgggggctgttcgatgctaatgcagaacaccataggatgtttttgtgttggttaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2367304 True 882 lncRNA 0.46 2 27833893 27921841

Neighbor

gene id symbol gene type direction distance location
LOC118944706 NA coding downstream 10132 27816137 ~ 27823761 (-)
LOC118944705 LOC106581256 coding downstream 15184 27817113 ~ 27818709 (-)
LOC118944704 LOC106581256 coding downstream 20630 27811641 ~ 27813263 (-)
LOC118944697 LOC106581256 coding downstream 35294 27796265 ~ 27798599 (-)
LOC118944650 NA coding downstream 47479 27783271 ~ 27786414 (-)
LOC110507895 LOC106581259 coding upstream 41940 27963781 ~ 27967676 (-)
LOC110507894 LOC106581257 coding upstream 50245 27972086 ~ 27975216 (-)
LOC110507896 LOC106581262 coding upstream 61245 27983086 ~ 27994009 (-)
LOC110507901 LOC106581268 coding upstream 564532 28486373 ~ 28491070 (-)
LOC110507147 nos2 coding upstream 569744 28491585 ~ 28513616 (-)
G2070353 NA non-coding downstream 398 27832835 ~ 27833495 (-)
G2070342 NA non-coding downstream 30239 27753068 ~ 27803654 (-)
G2070346 NA non-coding downstream 40414 27770159 ~ 27793479 (-)
G2070343 NA non-coding downstream 44850 27755443 ~ 27789043 (-)
G2070339 NA non-coding downstream 89638 27743988 ~ 27744255 (-)
G2070420 LOC107387520 non-coding upstream 72613 27994454 ~ 27994718 (-)
G2070424 NA non-coding upstream 75390 27997231 ~ 27997702 (-)
G2070425 NA non-coding upstream 76405 27998246 ~ 27998476 (-)
G2070427 NA non-coding upstream 78591 28000432 ~ 28000649 (-)
G2070429 NA non-coding upstream 79698 28001539 ~ 28002359 (-)
G2069842 NA other downstream 293284 27540000 ~ 27540609 (-)
LOC110507887 LOC106581252 other downstream 373245 27448217 ~ 27500051 (-)
LOC110507886 LOC106581251 other downstream 386395 27428483 ~ 27447544 (-)
LOC110507885 LOC106581250 other downstream 429515 27333102 ~ 27404380 (-)
G2068676 NA other downstream 1508414 26325130 ~ 26325479 (-)
G2070530 NA other upstream 248997 28170838 ~ 28172542 (-)
G2070744 NA other upstream 602105 28523946 ~ 28524550 (-)
G2071247 LOC106581281 other upstream 1019513 28941354 ~ 28942728 (-)
zgc:165508 LOC106613118 other upstream 1710071 29626155 ~ 29651489 (-)
G2072288 LOC100196662 other upstream 1908261 29822517 ~ 29833885 (-)

Expression


Co-expression Network