Gene
RNA
| Item | Value |
|---|---|
| gene id | G2071588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 29309792 ~ 29310184 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: chordin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2368713 | True | 393 | lncRNA | 0.44 | 1 | 29309792 | 29310184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507265 | NA | coding | downstream | 24379 | 29277995 ~ 29285413 (-) |
| LOC110507151 | LOC106581293 | coding | downstream | 58247 | 29217865 ~ 29251545 (-) |
| LOC110507150 | LOC106581286 | coding | downstream | 123715 | 29180624 ~ 29186077 (-) |
| LOC110507915 | LOC106581294 | coding | downstream | 143230 | 29107795 ~ 29166562 (-) |
| LOC110507149 | LOC106581284 | coding | downstream | 305585 | 28971334 ~ 29004207 (-) |
| zgc:165508 | LOC106613118 | coding | upstream | 319254 | 29626155 ~ 29651489 (-) |
| alp3 | LOC106580686 | coding | upstream | 348133 | 29658317 ~ 29672478 (-) |
| LOC110507923 | NA | coding | upstream | 373575 | 29683759 ~ 29756087 (-) |
| LOC110507921 | psmd2 | coding | upstream | 446386 | 29756570 ~ 29777646 (-) |
| LOC110507919 | LOC106580690 | coding | upstream | 544273 | 29854457 ~ 29860929 (-) |
| G2071506 | NA | non-coding | downstream | 29094 | 29176635 ~ 29280698 (-) |
| G2071557 | NA | non-coding | downstream | 35348 | 29267597 ~ 29274444 (-) |
| G2071487 | NA | non-coding | downstream | 167754 | 29140223 ~ 29142038 (-) |
| G2071316 | NA | non-coding | downstream | 251125 | 29058290 ~ 29058667 (-) |
| G2071589 | NA | non-coding | upstream | 3063 | 29313247 ~ 29340074 (-) |
| G2071590 | LOC106581290 | non-coding | upstream | 33138 | 29343322 ~ 29343833 (-) |
| G2071592 | LOC106581290 | non-coding | upstream | 34734 | 29344918 ~ 29345157 (-) |
| G2071594 | NA | non-coding | upstream | 38492 | 29348676 ~ 29348998 (-) |
| G2071595 | NA | non-coding | upstream | 39209 | 29349393 ~ 29349622 (-) |
| G2071247 | LOC106581281 | other | downstream | 367064 | 28941354 ~ 28942728 (-) |
| G2070744 | NA | other | downstream | 785242 | 28523946 ~ 28524550 (-) |
| G2070530 | NA | other | downstream | 1137250 | 28170838 ~ 28172542 (-) |
| LOC118944653 | LOC106581256 | other | downstream | 1420434 | 27872709 ~ 27889358 (-) |
| LOC118944698 | LOC106581256 | other | downstream | 1439697 | 27866010 ~ 27871529 (-) |
| G2072288 | LOC100196662 | other | upstream | 519918 | 29822517 ~ 29833885 (-) |
| G2072732 | NA | other | upstream | 1085591 | 30395775 ~ 30396680 (-) |
| G2074300 | NA | other | upstream | 2717444 | 32027628 ~ 32027967 (-) |
| G2076236 | NA | other | upstream | 3568605 | 32878789 ~ 32880888 (-) |
