G2072296



Basic Information


Item Value
gene id G2072296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 29839912 ~ 29840192 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2369529
aagaatttagtcctatttggtaaaagaccaagtccatattatgacaagaacagctcaaataagcaaagagaaacgacagtctgtcattactttaagacaagaaggtcagttcatctggaaaatgtcaagatctTTGAAAGtctcttcaaatgcagtcgcaaaaaccatgaagcgctgATGAAGAAaccggctctcatgaggaccgccacaggaaaggaagacccagaggataagttcattagagctgaatgtgtaggtgtgtccaaatattTGACTAGTAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2369529 True 281 lncRNA 0.40 1 29839912 29840192

Neighbor


gene id symbol gene type direction distance location
LOC110507921 psmd2 coding downstream 62266 29756570 ~ 29777646 (-)
LOC110507923 NA coding downstream 83825 29683759 ~ 29756087 (-)
alp3 LOC106580686 coding downstream 167434 29658317 ~ 29672478 (-)
zgc:165508 LOC106613118 coding downstream 188423 29626155 ~ 29651489 (-)
LOC110507265 NA coding downstream 554499 29277995 ~ 29285413 (-)
LOC110507919 LOC106580690 coding upstream 14265 29854457 ~ 29860929 (-)
LOC110507916 LOC106591944 coding upstream 40462 29880654 ~ 29884496 (-)
LOC110507932 kcne4 coding upstream 91435 29931627 ~ 29932989 (-)
LOC110507928 acsl3 coding upstream 96711 29936903 ~ 29972053 (-)
LOC110507931 LOC106581313 coding upstream 149968 29990160 ~ 29994173 (-)
G2072295 NA non-coding downstream 393 29839151 ~ 29839519 (-)
G2072294 NA non-coding downstream 1433 29838257 ~ 29838479 (-)
G2072292 NA non-coding downstream 1962 29837362 ~ 29837950 (-)
G2072288 LOC100196662 non-coding downstream 6027 29822517 ~ 29833885 (-)
G2072267 NA non-coding downstream 133403 29705619 ~ 29706509 (-)
G2072298 NA non-coding upstream 1302 29841494 ~ 29841753 (-)
G2072299 NA non-coding upstream 1720 29841912 ~ 29842260 (-)
G2072301 NA non-coding upstream 5476 29845668 ~ 29846898 (-)
G2072302 NA non-coding upstream 6970 29847162 ~ 29848462 (-)
G2072312 NA non-coding upstream 8363 29848555 ~ 29849666 (-)
G2071247 LOC106581281 other downstream 897184 28941354 ~ 28942728 (-)
G2070744 NA other downstream 1315362 28523946 ~ 28524550 (-)
G2070530 NA other downstream 1667370 28170838 ~ 28172542 (-)
G2072732 NA other upstream 555583 30395775 ~ 30396680 (-)
G2074300 NA other upstream 2187436 32027628 ~ 32027967 (-)
G2076236 NA other upstream 3038597 32878789 ~ 32880888 (-)
G2077617 NA other upstream 5276190 35116382 ~ 35154043 (-)
G2077934 NA other upstream 5594682 35434874 ~ 35435212 (-)

Expression



Co-expression Network