G2072560


Basic Information

Item Value
gene id G2072560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 30203688 ~ 30257517 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2369836
NNNAAAACTGCAAACCTCTTTAACTGCTGTTGCTGAAGAGGATTGACAAAGCTCGAGTAGTGGCACACTTTACATTGTTTTTGTAGTTACTAAGCAATTAATGAAATTCCAAAAACAAATCTGGCATAAAAACAGACAACTATCGATAGTACTTTGAAGACATCATAGACagtcatacagacacacacacacaccgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaggctatAAGAATAGGAGGACACGGAAAGGGAAGCGACATGGAAACTGTTTCTATAAATAAGGTAAGCAACGGTCAGTGTTTCTTCAAGCACATTATAAATCACCTATGTACATGatatagtcacacacacacacacacaccaccaaatGTGCGCACATACTCACATACAGACTCATGCATACACactgtccccctctccccttacCTTTCCTTGGCCTCTATTTCTTACATCACTTGGAGAAAATGACAATTTTCGTGGTATTGCTTTGTGCACTGACTTTACTGAACTCTGGAGAAAACGAACATTGTCGCTGGGTGAGTAcatctgacaatgtgctctcccATCCATTAGACGTTTTGTCTGCGGGAACTCGCTCttcttacagtttttttcgattgctaaacgacagtgggcacaactggagtcacatgtgcaaaactctaactacagtctgcactaccaacagtcacctgagctaaacagttcacatcacctgcaaaactcattccaagcaacacaactcttaacacatggctcaaaacacgctcagtgcagccaaacactatgcacaaccctcactgagataacacacactgtcactcagaacacactgagagtaaaaacactagcatcaaacaccaatacagaaaatacaaacttttcatctttacagtttgaacaatttcagtgacttcatacaaagtaatattttcttcaaagaaaagagtgacattctttcacatgatttattaacatttttagaacatgacaattctttaaggtaaatgaaaattagcagtttgcttcaatagtctgtagtaatttacggaattacagtaatgagaaaaaaaaggtagaaactaaaagtacatactgtaattcgaacaaataattgaggggctaatcctgcctctctctagcatcaggccacaggttttcttcaacatcacatctaatgttttctcttgccatgcacctggggaagaaccttccaaaagagacatttggtcatgtgggtggtgaccaaacactttccacctccaggcagagaaaaactcctctattgggttgaggaagggtgaatatgcaggcaggtacaaaaccatacaTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107687231 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2369836 True 1413 lncRNA 0.40 2 30203688 30257517

Neighbor

gene id symbol gene type direction distance location
LOC110507931 LOC106581313 coding downstream 209515 29990160 ~ 29994173 (-)
LOC110507928 acsl3 coding downstream 231635 29936903 ~ 29972053 (-)
LOC110507932 kcne4 coding downstream 270699 29931627 ~ 29932989 (-)
LOC110507916 LOC106591944 coding downstream 319192 29880654 ~ 29884496 (-)
LOC110507919 LOC106580690 coding downstream 342759 29854457 ~ 29860929 (-)
LOC110507937 acpl2 coding upstream 336258 30593775 ~ 30621882 (-)
LOC118944677 NA coding upstream 350312 30607829 ~ 30609111 (-)
LOC110507935 LOC106581306 coding upstream 425937 30683454 ~ 30724465 (-)
LOC118944654 LOC106613133 coding upstream 482263 30739780 ~ 30743661 (-)
LOC110507154 clstn2 coding upstream 493558 30751075 ~ 31200797 (-)
G2072459 NA non-coding downstream 30112 30173307 ~ 30173576 (-)
G2072457 NA non-coding downstream 32019 30171430 ~ 30171669 (-)
G2072451 NA non-coding downstream 38641 30164818 ~ 30165047 (-)
G2072402 NA non-coding downstream 126756 30076505 ~ 30076932 (-)
G2072397 NA non-coding downstream 137469 30065985 ~ 30066219 (-)
G2072626 NA non-coding upstream 68596 30326113 ~ 30333980 (-)
G2072635 NA non-coding upstream 79409 30336926 ~ 30337292 (-)
G2072656 NA non-coding upstream 107696 30365213 ~ 30365435 (-)
G2072801 NA non-coding upstream 267877 30525394 ~ 30554734 (-)
G2073160 NA non-coding upstream 308145 30565662 ~ 30566199 (-)
G2072288 LOC100196662 other downstream 371979 29822517 ~ 29833885 (-)
zgc:165508 LOC106613118 other downstream 552221 29626155 ~ 29651489 (-)
G2071247 LOC106581281 other downstream 1260960 28941354 ~ 28942728 (-)
G2070744 NA other downstream 1679138 28523946 ~ 28524550 (-)
G2070530 NA other downstream 2031146 28170838 ~ 28172542 (-)
G2072732 NA other upstream 138258 30395775 ~ 30396680 (-)
G2074300 NA other upstream 1770111 32027628 ~ 32027967 (-)
G2076236 NA other upstream 2621272 32878789 ~ 32880888 (-)
G2077617 NA other upstream 4858865 35116382 ~ 35154043 (-)
G2077934 NA other upstream 5177357 35434874 ~ 35435212 (-)

Expression


Co-expression Network