G2073272


Basic Information

Item Value
gene id G2073272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 30762222 ~ 30765491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2370627
tctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactcctttctaaacattccctcctctccactgtatctccactccattctaaacattctctcctctccactgtatctCCACACATTCTAAACATTCCCTCCTCTCCACTGAATTCTAAACATtccctcctctccactgtatCTCCATTCCATTCtaaacattctctcctctccactgtatctCCACTCCATTCTAAACATTCCCTGCTCTCCACTCCATTCTAAAcattccctcctctcc
>TU2370628
tctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactcctttctaaacattccctcctctccactgtatctccactccattctaaacattctctcctctccactgtatctCCACACATTCTAAACATTCCCTCCTCTCCACTGAATTCTAAACATtccctcctctccactgtatCTCCATTCCATTCtaaacattctctcctctccactgtatctCCACTCCATTCTAAACATTCCCTGCTCTCCACTCCATTCTAAAcattccctcctctcc
>TU2370629
tctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAaacattctctcctctccactcctttctaaacattccctcctATCCACTGTATCTCCACTCCATTCTAaacattctctcctctccactgtatctCCACTCCTTTCTAAACATtccctcctctccactgtatCTCCACTCCATTCTAAACATTCCCTGCTCTCCACTGTATCTCCACTCCATTCTAAAcattccctcctctccactccattcTAAACATTCCCTACTCTCCACTGTATCTCCACTCCATTCTAAAcattccctcctctccactccattctaaacattccctcctctccactgtatctccactccattctaaacattctctcctctccactgtatctCCACTCCATTCTAAACATTCCCTGCTCTCCACTCCATTCTAAAcattccctcctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2370627 False 366 lncRNA 0.45 2 30762222 30764466
TU2370628 False 366 lncRNA 0.45 2 30762222 30765491
TU2370629 True 512 lncRNA 0.45 2 30762222 30765491

Neighbor

gene id symbol gene type direction distance location
LOC118944654 LOC106613133 coding downstream 18561 30739780 ~ 30743661 (-)
LOC110507935 LOC106581306 coding downstream 37757 30683454 ~ 30724465 (-)
LOC110507937 acpl2 coding downstream 140340 30593775 ~ 30621882 (-)
LOC118944677 NA coding downstream 153111 30607829 ~ 30609111 (-)
LOC110507931 LOC106581313 coding downstream 768049 29990160 ~ 29994173 (-)
LOC110507962 LOC106613113 coding upstream 566785 31332276 ~ 31358483 (-)
LOC110507961 LOC106581358 coding upstream 866056 31631547 ~ 31633359 (-)
LOC110507960 LOC106581357 coding upstream 870933 31636424 ~ 31638259 (-)
lpar5b LOC106581285 coding upstream 917436 31682927 ~ 31684215 (-)
gpr55a LOC106581353 coding upstream 923316 31688807 ~ 31695914 (-)
G2073164 NA non-coding downstream 190239 30571416 ~ 30571983 (-)
G2073160 NA non-coding downstream 196023 30565662 ~ 30566199 (-)
G2072801 NA non-coding downstream 207488 30525394 ~ 30554734 (-)
G2072656 NA non-coding downstream 396787 30365213 ~ 30365435 (-)
LOC110507154 clstn2 non-coding upstream 14054 30751075 ~ 31200797 (-)
G2073296 NA non-coding upstream 44986 30810477 ~ 30811288 (-)
G2073303 NA non-coding upstream 56176 30821667 ~ 30825810 (-)
G2073304 NA non-coding upstream 57720 30823211 ~ 30823552 (-)
G2073336 NA non-coding upstream 117387 30882878 ~ 30888312 (-)
G2072732 NA other downstream 365542 30395775 ~ 30396680 (-)
G2072288 LOC100196662 other downstream 930513 29822517 ~ 29833885 (-)
zgc:165508 LOC106613118 other downstream 1110755 29626155 ~ 29651489 (-)
G2071247 LOC106581281 other downstream 1819494 28941354 ~ 28942728 (-)
G2070744 NA other downstream 2237672 28523946 ~ 28524550 (-)
G2074300 NA other upstream 1262137 32027628 ~ 32027967 (-)
G2076236 NA other upstream 2113298 32878789 ~ 32880888 (-)
G2077617 NA other upstream 4350891 35116382 ~ 35154043 (-)
G2077934 NA other upstream 4669383 35434874 ~ 35435212 (-)
G2077936 NA other upstream 4670103 35435594 ~ 35436257 (-)

Expression


Co-expression Network