Gene
RNA
| Item | Value |
|---|---|
| gene id | G2073761 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 31421213 ~ 31427845 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sperm acrosomal protein FSA-ACR.1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2371165 | False | 800 | lncRNA | 0.44 | 2 | 31421213 | 31422057 |
| TU2371167 | True | 473 | lncRNA | 0.42 | 2 | 31427208 | 31427845 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507962 | LOC106613113 | coding | downstream | 62730 | 31332276 ~ 31358483 (-) |
| LOC110507154 | clstn2 | coding | downstream | 220416 | 30751075 ~ 31200797 (-) |
| LOC118944654 | LOC106613133 | coding | downstream | 677552 | 30739780 ~ 30743661 (-) |
| LOC110507935 | LOC106581306 | coding | downstream | 696748 | 30683454 ~ 30724465 (-) |
| LOC118944677 | NA | coding | downstream | 812102 | 30607829 ~ 30609111 (-) |
| LOC110507961 | LOC106581358 | coding | upstream | 203702 | 31631547 ~ 31633359 (-) |
| LOC110507960 | LOC106581357 | coding | upstream | 208579 | 31636424 ~ 31638259 (-) |
| lpar5b | LOC106581285 | coding | upstream | 255082 | 31682927 ~ 31684215 (-) |
| gpr55a | LOC106581353 | coding | upstream | 260962 | 31688807 ~ 31695914 (-) |
| LOC110507954 | NA | coding | upstream | 275252 | 31701005 ~ 31707717 (-) |
| G2073635 | NA | non-coding | downstream | 54273 | 31366731 ~ 31366940 (-) |
| G2073619 | NA | non-coding | downstream | 92386 | 31327646 ~ 31328827 (-) |
| G2073602 | NA | non-coding | downstream | 116203 | 31304784 ~ 31305010 (-) |
| G2073601 | NA | non-coding | downstream | 117147 | 31303275 ~ 31304066 (-) |
| G2073812 | NA | non-coding | upstream | 157990 | 31585835 ~ 31587403 (-) |
| G2073855 | NA | non-coding | upstream | 160557 | 31588402 ~ 31588779 (-) |
| G2073856 | NA | non-coding | upstream | 163718 | 31591563 ~ 31591990 (-) |
| G2073857 | NA | non-coding | upstream | 166215 | 31594060 ~ 31594313 (-) |
| G2073858 | NA | non-coding | upstream | 166758 | 31594603 ~ 31594821 (-) |
| G2072732 | NA | other | downstream | 1024533 | 30395775 ~ 30396680 (-) |
| G2072288 | LOC100196662 | other | downstream | 1589504 | 29822517 ~ 29833885 (-) |
| zgc:165508 | LOC106613118 | other | downstream | 1769746 | 29626155 ~ 29651489 (-) |
| G2071247 | LOC106581281 | other | downstream | 2478485 | 28941354 ~ 28942728 (-) |
| G2070744 | NA | other | downstream | 2896663 | 28523946 ~ 28524550 (-) |
| G2074300 | NA | other | upstream | 599783 | 32027628 ~ 32027967 (-) |
| G2076236 | NA | other | upstream | 1450944 | 32878789 ~ 32880888 (-) |
| G2077617 | NA | other | upstream | 3688537 | 35116382 ~ 35154043 (-) |
| G2077934 | NA | other | upstream | 4007029 | 35434874 ~ 35435212 (-) |
| G2077936 | NA | other | upstream | 4007749 | 35435594 ~ 35436257 (-) |
