Gene
RNA
| Item | Value |
|---|---|
| gene id | G2074217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 31958752 ~ 31959031 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: stress response protein NST1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2371716 | True | 280 | lncRNA | 0.34 | 1 | 31958752 | 31959031 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944767 | NA | coding | upstream | 87045 | 31870740 ~ 31871707 (+) |
| LOC110507951 | LOC106581346 | coding | upstream | 90452 | 31853996 ~ 31868448 (+) |
| efhd1 | LOC106581350 | coding | upstream | 187987 | 31748676 ~ 31770765 (+) |
| trnag-ucc-233 | NA | coding | upstream | 210400 | 31748281 ~ 31748352 (+) |
| trnaw-cca-60 | NA | coding | upstream | 211539 | 31747142 ~ 31747213 (+) |
| LOC110507983 | LOC106581345 | coding | downstream | 311175 | 32270206 ~ 32488659 (+) |
| LOC110507985 | LOC106613152 | coding | downstream | 569542 | 32528573 ~ 32591906 (+) |
| LOC110507986 | NA | coding | downstream | 984776 | 32943807 ~ 32963656 (+) |
| vwa7 | LOC106581332 | coding | downstream | 1120763 | 33079794 ~ 33093823 (+) |
| LOC110507993 | LOC106581333 | coding | downstream | 1146152 | 33105183 ~ 33111804 (+) |
| G2074214 | NA | non-coding | upstream | 639 | 31952063 ~ 31958113 (+) |
| G2074213 | NA | non-coding | upstream | 13006 | 31945330 ~ 31945746 (+) |
| G2074199 | NA | non-coding | upstream | 39625 | 31918900 ~ 31919127 (+) |
| G2074192 | NA | non-coding | upstream | 43712 | 31914694 ~ 31915040 (+) |
| G2074188 | NA | non-coding | upstream | 45308 | 31906482 ~ 31913444 (+) |
| G2074223 | NA | non-coding | downstream | 4094 | 31963125 ~ 31963433 (+) |
| G2074312 | NA | non-coding | downstream | 75100 | 32034131 ~ 32034693 (+) |
| G2074313 | NA | non-coding | downstream | 76075 | 32035106 ~ 32035363 (+) |
| G2074319 | NA | non-coding | downstream | 81326 | 32040357 ~ 32040615 (+) |
| G2074349 | NA | non-coding | downstream | 117061 | 32076092 ~ 32079842 (+) |
| G2072515 | NA | other | upstream | 1686755 | 30270111 ~ 30271997 (+) |
| G2072178 | NA | other | upstream | 1943928 | 30011465 ~ 30014824 (+) |
| G2071807 | NA | other | upstream | 2318453 | 29638879 ~ 29640299 (+) |
| LOC110507925 | LOC105015878 | other | upstream | 2431392 | 29398701 ~ 29609924 (+) |
| LOC110507926 | LOC106581290 | other | upstream | 2651620 | 29301663 ~ 29353272 (+) |
| G2074226 | NA | other | downstream | 6987 | 31966018 ~ 31974065 (+) |
| G2074227 | NA | other | downstream | 9506 | 31968537 ~ 31976501 (+) |
| G2074502 | NA | other | downstream | 237782 | 32196813 ~ 32197204 (+) |
| G2074577 | NA | other | downstream | 352959 | 32311990 ~ 32312276 (+) |
