G2078120



Basic Information


Item Value
gene id G2078120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35728640 ~ 35728951 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2376011
GCTccatactcactctctccctttcgttcattcctcatcgacccctcctctcgggCTACAGAGTGGCTccatactcactctctccctctcgttcattcctcatcgacccctcctctcattcattcctcatcgacccctcctctcgttcattcctcatcgacccctcctctcaggCTACAGTGGCTccatactcactctctccctctcgttcattcctcatcgacccctcctctcgggCTACAGAGTGGCTccatactcactctctccctctcgttcattcctcatcgacccctcctctcggtCTACAGAGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2376011 True 312 lncRNA 0.55 1 35728640 35728951

Neighbor


gene id symbol gene type direction distance location
LOC110507210 gria4 coding downstream 398023 35169232 ~ 35330617 (-)
LOC110507205 LOC106581390 coding downstream 829232 34898581 ~ 34899408 (-)
LOC110507204 NA coding downstream 833957 34886462 ~ 34894683 (-)
LOC110507202 LOC106581387 coding downstream 859384 34866113 ~ 34869256 (-)
LOC110507200 LOC106581380 coding downstream 876898 34850844 ~ 34851742 (-)
LOC110507269 NA coding upstream 54542 35783493 ~ 35787697 (-)
LOC110507979 rab38 coding upstream 347192 36076143 ~ 36107044 (-)
LOC110507212 NA coding upstream 378765 36107716 ~ 36108445 (-)
LOC110507213 LOC106581415 coding upstream 403786 36129462 ~ 36264360 (-)
LOC110508009 nox4 coding upstream 566099 36295050 ~ 36364517 (-)
G2078083 NA non-coding downstream 51044 35677284 ~ 35677596 (-)
G2078073 NA non-coding downstream 57743 35670666 ~ 35670897 (-)
G2078040 NA non-coding downstream 120999 35584795 ~ 35607641 (-)
G2077973 NA non-coding downstream 205989 35522171 ~ 35522651 (-)
G2077959 NA non-coding downstream 244994 35482344 ~ 35483646 (-)
G2078124 NA non-coding upstream 1553 35730504 ~ 35730722 (-)
G2078136 NA non-coding upstream 12138 35741089 ~ 35741333 (-)
G2078156 NA non-coding upstream 25291 35754242 ~ 35754482 (-)
G2078163 NA non-coding upstream 31034 35759985 ~ 35760201 (-)
G2078202 NA non-coding upstream 71708 35800659 ~ 35800898 (-)
G2078119 NA other downstream 1158 35726856 ~ 35727482 (-)
G2077936 NA other downstream 292383 35435594 ~ 35436257 (-)
G2077934 NA other downstream 293428 35434874 ~ 35435212 (-)
G2077617 NA other downstream 574597 35116382 ~ 35154043 (-)
G2076236 NA other downstream 2847752 32878789 ~ 32880888 (-)
G2078218 NA other upstream 98165 35827116 ~ 35827711 (-)
G2078260 NA other upstream 129951 35858902 ~ 35866253 (-)
G2078263 NA other upstream 144351 35873302 ~ 35876648 (-)
G2078637 NA other upstream 373749 36102700 ~ 36104141 (-)

Expression



Co-expression Network