G2079854


Basic Information

Item Value
gene id G2079854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37627029 ~ 37631119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378251
gggaaaactcTGGGTTCTAAATGAGAGGGGTTCACCCCAATACCTTCTGGTAGAGATGGGGTGAACCAAGCACGGCCTGGATATAGACGAGGGTGTGTCTATGTGGGATTGTATCCCCTTATTGGTTTGTAATTTCTTTGAGTGAATGTCTTGTCTCAAGGAGGAGGGAAAGAAGTGGAGTGGAtaaggagagaaaggaagaggttAAGAACAGTGGATAAGGAATGAAAGGAAGAGGATAAGAACAGTGGAtaaggagagaaaggaagaggataagaacagtggataaggagagaaagaaagaggataagaacagtggataaggagagaaaggaagaggataAGAACAGTGGATAAGGAGAAAAAGGAAGAGGATAAGAACAGTGGATAAGGAGAGGATAAGAACAGTGGATAAGGAGTGAAAGGAAGAGGATAAGAACAGTGGATAAGGAGTGAAAGGAAGAGgataagaacagtggataaggagtgaaagggagaggttaAGAACAGTGGATGAGTGAAAGGAAGAGGTTAAGAACAGTGGATAAGGAGAGGTTAAGAACAGTGGATaaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaagggagagGTTAAAAACAGTGGATAAGGAGTGAAAGGAAGTGGTTAAGAACAGTGGATAAGGAGAGGTTAAGAACAGTGGACAAGGAGAGGTTAAGAACAGTGGATAAGGAGAGGTTAAGAACAGTGGATAAGGAGAGGATAAGAACAGTGGATaaggagtgaaagggagaggttaAGAACAGTGGATAAGGAGTGAAAGGAAGAGGTTAAAAACAGTGGATAAGGAGTGAAAGGAAGAGATTAAGAACAGTGGATAAGGAGAGGTTAAGAACAGTGGATAAGGAGTGAAAGGAAGAGGATAAGAACAGTGGATAAGGAGTGAAAGGGAGAGTTTAAGAACAGTGGATAGGAGTGAAAGGAAGAGGTTAAAAACAGTGGATAAGGAGTGAAAGGAAGAGGTTAAGAACAGTGGATaaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagagtttaagaacagtggataaggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagagTTTAAGAACAGTGGATAAGGAGAGGTTAAGAACAGTGGATaaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagtgaaagggagaggttaAGAACAATGGATaaggagtgaaagggagaggttaAGATTAGTGGATAAGGAGAGGTTAAGAACAGTGGATaaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggataagaacagtggataaggagtgaaaggaagaggataagaacagtggataaggagagaaaggaagaggataagaacagtggataaggagggaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagtgaaagggagaggttaagaacagtggataaggagagaaagggagaggttaaaaacagtggataaggagtgaaaggaagaggttaagaacagtggataaggagagaaagggagaggttaagaacagtggataaggagagaaagggagaggttaaGAACAGTGGATAAGGAGAAGGAGTGAAAGGAATGTCAGCCAGCATGcctcaacagacagacagacagacaaacaggcagacctacaggcagacagacagaaaagagGAGACACCACAATCAAGCTCTTAAATGTCCCAGCTGATAGTGACTGTAACTGTGGTTACTCCAACAGCAACAGGAAGCTTACTGCAGCCTCTCACCTCTGAGTATTTGGGACAAGAGGAGGAAACCAACCTAAACTACACACATTACACTGTATTcactgggaacacacacacacacacactgtacaaagTCATACATGATCTATGGTAATAGTTAACGGGTCAGGTATATTCTTTGTAAGTTGTGGATCTTACTTTGACTCTCCTACACACCTTGGAAACGTTTAATGCCCCGACTTAAAAACATTTTGGCCTGTGTAACAGGATACAGCGGTGTGGCTGGGCTGTTATGAAGCCGTCCGTctgtcctgccgtacatacaggAAATGGAGCAGTTGGGAACACATCCAGGCGGCCCGTGCCACTGCGGTCCCCATCCCAATGTCAGCCAAGAATATCCCTGCCAAGGAAATTCCCACTTCAATCCCAAGTCTGAATTCGACCTGGGCCCAGTTCTCTGGACGCAGGGCTCAGGAACATTGTAATTGAAGGAGAGACTGCGACACGAGCTAGAGGGGGAACTATTTCAGACCTGGAACGCTATATCCTAGTCCTAGTGATCAGAGGGGGAACTATTCCAGAGACACGAGCCAGAGGGGGAACTATTCCTGAGACACGAGCCAGAGGGGGAACTATTCCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378251 True 2918 lncRNA 0.44 7 37627029 37631119
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944676 NA coding downstream 40527 37584676 ~ 37586502 (-)
LOC110512371 LOC106613235 coding downstream 102392 37417331 ~ 37524637 (-)
LOC110508027 LOC106593875 coding downstream 240792 37366649 ~ 37386237 (-)
LOC110508024 LOC106581427 coding downstream 309506 37296427 ~ 37317523 (-)
cep57 LOC106581428 coding downstream 331192 37277694 ~ 37295837 (-)
LOC110508016 LOC106581424 coding upstream 24408 37655526 ~ 37771916 (-)
LOC110508019 LOC106581425 coding upstream 147791 37778910 ~ 37807050 (-)
LOC110508020 LOC107705757 coding upstream 189333 37820452 ~ 37869522 (-)
LOC110508004 NA coding upstream 985571 38616690 ~ 38619627 (-)
LOC110508001 LOC106581419 coding upstream 1928834 39559953 ~ 39600982 (-)
G2079841 NA non-coding downstream 21510 37604855 ~ 37605519 (-)
G2079810 NA non-coding downstream 75878 37549348 ~ 37551151 (-)
G2079811 NA non-coding downstream 76350 37550038 ~ 37550679 (-)
G2079808 NA non-coding downstream 79020 37546951 ~ 37548009 (-)
G2079787 NA non-coding downstream 113904 37512812 ~ 37513125 (-)
G2079860 NA non-coding upstream 7475 37638594 ~ 37638844 (-)
G2079861 NA non-coding upstream 12077 37643196 ~ 37643419 (-)
G2079862 NA non-coding upstream 13043 37644162 ~ 37644421 (-)
G2079863 NA non-coding upstream 14034 37645153 ~ 37645470 (-)
G2079864 NA non-coding upstream 15997 37647116 ~ 37647348 (-)
G2079746 NA other downstream 212815 37409233 ~ 37414330 (-)
G2079412 LOC106581431 other downstream 350084 37273506 ~ 37276945 (-)
G2079423 NA other downstream 371003 37254882 ~ 37256026 (-)
G2079301 NA other downstream 698897 36922262 ~ 36928132 (-)
G2080063 NA other upstream 353106 37984225 ~ 37984681 (-)
G2081106 NA other upstream 1306092 38937211 ~ 38937945 (-)
G2081616 NA other upstream 1802159 39433278 ~ 39433698 (-)
G2082006 NA other upstream 2041613 39672732 ~ 39681547 (-)
lekr1 LOC106581448 other upstream 2526958 39984103 ~ 40190414 (-)

Expression

G2079854 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G2079854 Expression in each Bioproject

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G2079854 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network