Gene
RNA
| Item | Value |
|---|---|
| gene id | G2079600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 37627821 ~ 37631175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2377861 | False | 3161 | lncRNA | 0.43 | 2 | 37627821 | 37631175 |
| TU2377863 | False | 1362 | lncRNA | 0.42 | 3 | 37627821 | 37629717 |
| TU2377864 | True | 1625 | lncRNA | 0.42 | 4 | 37627821 | 37629717 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508012 | LOC106581399 | coding | upstream | 58948 | 37536529 ~ 37568873 (+) |
| trnat-agu-152 | NA | coding | upstream | 122019 | 37505729 ~ 37505802 (+) |
| trnat-agu-151 | NA | coding | upstream | 122187 | 37505561 ~ 37505634 (+) |
| mre11a | mre11a | coding | upstream | 270215 | 37318716 ~ 37357606 (+) |
| LOC110536894 | NA | coding | upstream | 352739 | 37031161 ~ 37276857 (+) |
| LOC110508017 | NA | coding | downstream | 421458 | 38052633 ~ 38060113 (+) |
| LOC110507217 | NA | coding | downstream | 838743 | 38469918 ~ 38474599 (+) |
| LOC110508002 | LOC106581401 | coding | downstream | 988375 | 38619550 ~ 38628170 (+) |
| LOC118944799 | NA | coding | downstream | 1408398 | 39039573 ~ 39039625 (+) |
| LOC110508028 | neus | coding | downstream | 2036814 | 39667989 ~ 39681560 (+) |
| G2079563 | NA | non-coding | upstream | 81731 | 37544545 ~ 37546090 (+) |
| G2079469 | NA | non-coding | upstream | 258085 | 37368859 ~ 37369736 (+) |
| G2079465 | NA | non-coding | upstream | 261914 | 37365664 ~ 37365907 (+) |
| G2079462 | NA | non-coding | upstream | 263437 | 37363277 ~ 37364384 (+) |
| G2079459 | NA | non-coding | upstream | 265963 | 37361581 ~ 37361858 (+) |
| G2079606 | NA | non-coding | downstream | 7711 | 37638886 ~ 37639112 (+) |
| G2079607 | NA | non-coding | downstream | 22624 | 37653799 ~ 37654022 (+) |
| G2079608 | NA | non-coding | downstream | 24353 | 37655528 ~ 37684763 (+) |
| G2079610 | NA | non-coding | downstream | 28412 | 37659587 ~ 37660543 (+) |
| G2079617 | NA | non-coding | downstream | 34638 | 37665813 ~ 37666183 (+) |
| G2079468 | LOC106581367 | other | upstream | 259685 | 37366739 ~ 37368136 (+) |
| G2079197 | NA | other | upstream | 346989 | 37279105 ~ 37280832 (+) |
| LOC110508005 | LOC106613226 | other | upstream | 1188467 | 36438225 ~ 36440709 (+) |
| G2078493 | NA | other | upstream | 1325779 | 36263506 ~ 36302664 (+) |
| G2079657 | NA | other | downstream | 184703 | 37815848 ~ 37819286 (+) |
| G2080014 | NA | other | downstream | 313757 | 37944932 ~ 37945151 (+) |
| G2081884 | LOC106581433 | other | downstream | 2196483 | 39827658 ~ 39837383 (+) |
| LOC110507223 | LOC106613251 | other | downstream | 2264492 | 39781189 ~ 39938079 (+) |
| G2081949 | NA | other | downstream | 2300699 | 39931874 ~ 39933835 (+) |
