G2082783


Basic Information

Item Value
gene id G2082783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40669356 ~ 40671624 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381632
ggagaACAACCTGATCTAGGATCATCTCATTATACCCCAAGCCTGATTTTCACCTTTAGGAGCGGAGCCCCATCTGAATGTGGACAGGTGGTTAGGGGCAGACATTAAAGGAGAAACACAGAATCTGATGTATCAGTGGTCAATGCAAATTATTTTGTTCAGCCTGATGTAGAATAGAgccccaaaataaataaaaataactcttgagaatttacaaacagaaaaacaTTAAAATGTTCTATGATATAAACCAAACAGAACCGATACAGGTGATCTCCAGATCCGGACATGACTGTTTACTGCCTTCTCCCTTTCACACAACCTCTGACCTGTCATTGCTGGTATAGAGAAAATACTGTTGTATTCAAAAAGTTAGAGACATAcgctgagtatacaaaacattaagacagACTGACCGGGTGAAAGcttttgatcccttattgatgtcacctgttagatccacttcaatcagtgtagatgaaggaggaggagacgggttaaagaaggattttcaagcccggagacaattgagacatgaattgtgtttgtgccattcagagggtgaattgtcaagaaaaaaatatttaagtgcctttgaacaggatatggtagtaggtgccagtcaCACCAGTGAGTTTCACGCTCCACAGTTTcccatcaagaatggtccaacacccaaaggacatccagccaacttgacaactgtgggaagcattggagtcaacatggcaaAAGGACTCAACATTAGGAACGTTTAACATAGTAACTcaataggaaggtgttcctaacgttttgtacactcagtgtatattaaaaCAGTAGTTATAATTTAGGCATTTCTTTCGAAGGGACAATAGATTAACATCAAGAATAGAAATGTGATTTCTGACTCCCATGTTCCACACAGAAACATGATCTATTTATCAACTAGGTCTTGGCTGCACATCTCAAAGTTCATATTTAACCATCCATATATGTGTGGTTTGCTTTTTATGACCATTCGTTGATgaatgcctttaaaaaaaaatatctgaccAACTTTAAAATCAGAGTCTTTGAAGAACAGAGCAAGGCACAAATAAACAGTGAGAAAGTGAAATAGTTTAAGTAGCAGACAATGTGGATTGAGAAGGAGCAGCTATGTCTACTGTAAATATTCCTAGCAAGAAGAATAGTTCCTTCTTTTGTTTCCAATGGGACATAGTTGAAGCGGCACCCACAGAAGCCATGGTGAGGACGTTGCAAGGAGAAATGTAACTCTTGACTCTCCAAGAGAGTATGTGGTTATTGACCGTTATGGTCCATAGTCTTGTGGTGGCCGGACCACAATTACAGTTAACGCATAGACAGACTGCTGAAGGATAATATATACACTGAGCAAAGGATAATATATACACTGAGCAAAGGGTGtgaagaagggggagagggaaaaaaAAGAGGGATACTGAGAAGAGTcatcagagaaggagagagagatggacagagaaaggagagaaataaagagagtcggaggaagacagaaaaacagaaatgagagagagaggaagtgatgttCAGGCCAGGGTCAAAGGCTGAGCTGACAGAAGCGTGTATATCAGACTGTAGCTGTCTGGCGATTGGCCTTGCTGGGGTCAGGAGCTGGGTGAACGTTGTCATTGGCCGATCCTGCACCTCCACGCTGCAGGGCTCTGGTCCTGTAGCCTTCTCATCCTGTTCCCTAGCCACACCCACCACGTTAGTCCTATCAACGCACACACCACCGACTCCACATAGTAACCATCCAAtgacgtcacacacacaccgccctCCTTAA

Function

NR:

description
acetyl-coenzyme A transporter 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381632 True 1813 lncRNA 0.42 2 40669356 40671624
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508038 LOC106581456 coding downstream 14833 40620620 ~ 40654523 (-)
LOC110508039 LOC106581455 coding downstream 62509 40601473 ~ 40606847 (-)
LOC110508036 kcnab1 coding downstream 104955 40299870 ~ 40564401 (-)
LOC110508035 tiparp coding downstream 417641 40223863 ~ 40251715 (-)
lekr1 LOC106581448 coding downstream 478942 39984103 ~ 40190414 (-)
LOC110508043 LOC106581485 coding upstream 175650 40847274 ~ 40854050 (-)
LOC110507273 LOC106581487 coding upstream 206487 40878111 ~ 40883459 (-)
LOC110507274 LOC106581485 coding upstream 236738 40908362 ~ 40913641 (-)
LOC110507275 LOC106581486 coding upstream 256763 40928387 ~ 40933600 (-)
LOC118944770 LOC106581475 coding upstream 272704 40944328 ~ 40952721 (-)
G2082793 NA non-coding downstream 5141 40663743 ~ 40664215 (-)
G2082779 NA non-coding downstream 42771 40626188 ~ 40626585 (-)
G2082774 NA non-coding downstream 56891 40612224 ~ 40612465 (-)
G2082770 NA non-coding downstream 61847 40607289 ~ 40607509 (-)
G2082784 NA non-coding upstream 70 40671694 ~ 40672518 (-)
G2082799 NA non-coding upstream 5941 40677565 ~ 40705762 (-)
G2082850 LOC106581453 non-coding upstream 93652 40765276 ~ 40768107 (-)
G2082884 NA non-coding upstream 168563 40840187 ~ 40840533 (-)
G2082885 NA non-coding upstream 168948 40840572 ~ 40841028 (-)
G2082006 NA other downstream 995903 39672732 ~ 39681547 (-)
G2081616 NA other downstream 1235658 39433278 ~ 39433698 (-)
G2081106 NA other downstream 1731411 38937211 ~ 38937945 (-)
LOC110508045 LOC106581475 other upstream 303085 40967894 ~ 40977862 (-)
G2083443 NA other upstream 751915 41423539 ~ 41424040 (-)
LOC118944786 LOC106581464 other upstream 1004627 41573411 ~ 41680789 (-)
G2084740 LOC106613316 other upstream 2113003 42784627 ~ 42785035 (-)

Expression

G2082783 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
End of interactive chart.

G2082783 Expression in each Bioproject

Bar chart with 19 bars.
G2082783 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network