G2083477


Basic Information

Item Value
gene id G2083477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41449302 ~ 41449680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382407
AACCACTGCCCTCTATATGCATGGACCCTTGTCCCATGTAAACCACTGCCCTCTATATTAATGGACCCTTGTCCCATGTAAACCACTGCCCTCTATATTAATGGAGCCTTGTCCCATGTAAAACACTGCCCTCTATATTAATGGACCCTTGTCCCATGTAAAACCACTGCCCTCTATATTAATGGACCCTTGTCCCATGTAAACCACTGCCCTCTATATTCATGGACCCTTGTCCCATGTAAACCACTGCCCTCTATATTAATGGAGCCTTGTCCCATGTAAAACACTGCCCTCTATATTAATGGACCCTTGTCCCATGTAAAACACTGCCCTCTATATTAATGGACCCTTGTCCCATGTAAACCACTGCCCTCTATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382407 True 379 lncRNA 0.45 1 41449302 41449680

Neighbor

gene id symbol gene type direction distance location
LOC110508050 LOC106581466 coding upstream 245607 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 263838 41180486 ~ 41185464 (+)
LOC110507231 LOC106581468 coding upstream 280818 41163243 ~ 41168484 (+)
LOC110508044 LOC106581474 coding upstream 452734 40992078 ~ 40996568 (+)
LOC118944684 LOC106613262 coding upstream 541989 40904514 ~ 40907313 (+)
LOC110507232 LOC106593204 coding downstream 35509 41485189 ~ 41507173 (+)
dhx36 dhx36 coding downstream 71766 41521446 ~ 41571922 (+)
LOC118944685 NA coding downstream 329241 41778921 ~ 41781836 (+)
LOC110507284 sucnr1 coding downstream 781678 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 949009 42398689 ~ 42416136 (+)
G2083471 NA non-coding upstream 2777 41445880 ~ 41446525 (+)
G2083466 NA non-coding upstream 6208 41442752 ~ 41443094 (+)
G2083403 NA non-coding upstream 56119 41391374 ~ 41393183 (+)
G2083398 NA non-coding upstream 82710 41362562 ~ 41366592 (+)
G2083384 NA non-coding upstream 104763 41344295 ~ 41344539 (+)
G2083479 NA non-coding downstream 1140 41450820 ~ 41451064 (+)
G2083495 NA non-coding downstream 18340 41468020 ~ 41468336 (+)
G2083517 NA non-coding downstream 41795 41491475 ~ 41491730 (+)
G2083518 NA non-coding downstream 43181 41492861 ~ 41493149 (+)
G2083239 NA other upstream 236530 41212204 ~ 41212772 (+)
G2083005 NA other upstream 464448 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 603263 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1491551 39957215 ~ 39957751 (+)
G2081949 NA other upstream 1515467 39931874 ~ 39933835 (+)
G2083851 NA other downstream 521579 41971259 ~ 42112036 (+)
G2084156 NA other downstream 810843 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1613608 43063288 ~ 43064257 (+)
G2085037 NA other downstream 2082590 43532270 ~ 43532578 (+)

Expression


Co-expression Network