Gene
RNA
| Item | Value |
|---|---|
| gene id | G2084505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 42649934 ~ 42650551 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| collagen alpha-1(XXI) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2383629 | True | 330 | lncRNA | 0.39 | 2 | 42649934 | 42650551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944772 | LOC106581517 | coding | downstream | 33 | 42647144 ~ 42649901 (-) |
| LOC110508058 | LOC106581494 | coding | downstream | 85354 | 42561570 ~ 42564580 (-) |
| neu4 | LOC106581489 | coding | downstream | 109594 | 42516527 ~ 42540340 (-) |
| aadac | LOC106613299 | coding | downstream | 364389 | 42262030 ~ 42285545 (-) |
| LOC110508063 | LOC106581498 | coding | downstream | 542770 | 41926917 ~ 42107164 (-) |
| LOC110519585 | LOC106581519 | coding | upstream | 645260 | 43295811 ~ 43529347 (-) |
| LOC110508094 | tnfaip1 | coding | upstream | 885004 | 43535555 ~ 43549204 (-) |
| tmem97 | tmem97 | coding | upstream | 906025 | 43556576 ~ 43558533 (-) |
| LOC110508089 | LOC106581526 | coding | upstream | 1086519 | 43737070 ~ 43762876 (-) |
| LOC110508088 | LOC106581525 | coding | upstream | 1118689 | 43769240 ~ 43783275 (-) |
| G2084495 | NA | non-coding | downstream | 7683 | 42641938 ~ 42642251 (-) |
| G2084484 | NA | non-coding | downstream | 20698 | 42627722 ~ 42629236 (-) |
| G2084481 | NA | non-coding | downstream | 29317 | 42620195 ~ 42620617 (-) |
| G2084468 | NA | non-coding | downstream | 69315 | 42580066 ~ 42580619 (-) |
| G2084685 | NA | non-coding | upstream | 15564 | 42666115 ~ 42666373 (-) |
| G2084715 | NA | non-coding | upstream | 65456 | 42716007 ~ 42716300 (-) |
| G2084725 | NA | non-coding | upstream | 92940 | 42743491 ~ 42744263 (-) |
| G2084690 | NA | non-coding | upstream | 166402 | 42816953 ~ 42817378 (-) |
| G2084753 | NA | non-coding | upstream | 169072 | 42819623 ~ 42819834 (-) |
| LOC118944786 | LOC106581464 | other | downstream | 969242 | 41573411 ~ 41680789 (-) |
| G2083443 | NA | other | downstream | 1225894 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 1674727 | 40967894 ~ 40977862 (-) |
| LOC110507273 | LOC106581487 | other | downstream | 1768697 | 40878111 ~ 40883459 (-) |
| LOC110508038 | LOC106581456 | other | downstream | 2028240 | 40620620 ~ 40654523 (-) |
| G2084740 | LOC106613316 | other | upstream | 134076 | 42784627 ~ 42785035 (-) |
| G2085726 | NA | other | upstream | 1261609 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 2270358 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 2879805 | 45530356 ~ 45530780 (-) |
| G2087288 | NA | other | upstream | 3146519 | 45797070 ~ 45798330 (-) |
