G2084869


Basic Information

Item Value
gene id G2084869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43087199 ~ 43087871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384115
ctgtatatagcctcgctattgttatttactgctgctctttaattatttgtaattcttatctcttacttttttttaagGTCTTTTctattccccaattacatgttcattatttaaccctctgtttcccccatgtttgtgtgcgtgtttgtataTCATGTTCAGGTCATTACTTGTTGGATGGTATTGTTTGCCGGGTTCATTATTACGCCCGTTATTTACGAGTGACCGGTTATTTCACGCACCTTTAGTATTAGTTTTATACTGATGCTGTTCGTGGAATAAATTACCGTATtacactcatctctgctctcctgctcttGATTCCATGCACCAGTTACCCACAGCCTGAcacagaacaacagatgtttaccttgtcagctcggggattcaatcttacaaacttccggttactagtccagctctaacaactaggctaatacctgcctccccaacagtttcttcactgtatttctgatcaatttgatgtcattttaatggacaaaaatgtgctttttttttcaaaaacaagggcatttctaagtgacgccAAACTTTTGAACAATAGTGTATGTGTTAAGGCTTTACACACCCTGCTATAttatggataaagagttacctgtctaatacaacacagaaagtgttctttaatggaagccttgccaacataatccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384115 True 673 lncRNA 0.38 1 43087199 43087871

Neighbor

gene id symbol gene type direction distance location
LOC118944772 LOC106581517 coding downstream 437298 42647144 ~ 42649901 (-)
LOC110508058 LOC106581494 coding downstream 522619 42561570 ~ 42564580 (-)
neu4 LOC106581489 coding downstream 546859 42516527 ~ 42540340 (-)
aadac LOC106613299 coding downstream 801654 42262030 ~ 42285545 (-)
LOC110508063 LOC106581498 coding downstream 980035 41926917 ~ 42107164 (-)
LOC110519585 LOC106581519 coding upstream 207940 43295811 ~ 43529347 (-)
LOC110508094 tnfaip1 coding upstream 447684 43535555 ~ 43549204 (-)
tmem97 tmem97 coding upstream 468705 43556576 ~ 43558533 (-)
LOC110508089 LOC106581526 coding upstream 649199 43737070 ~ 43762876 (-)
LOC110508088 LOC106581525 coding upstream 681369 43769240 ~ 43783275 (-)
G2084868 NA non-coding downstream 231 43086737 ~ 43086968 (-)
G2084867 NA non-coding downstream 581 43086316 ~ 43086618 (-)
G2084844 NA non-coding downstream 1554 43083018 ~ 43085645 (-)
G2084813 NA non-coding downstream 64257 42949733 ~ 43022942 (-)
G2084870 NA non-coding upstream 4435 43092306 ~ 43092693 (-)
G2084871 NA non-coding upstream 4852 43092723 ~ 43094394 (-)
G2084877 NA non-coding upstream 12742 43100613 ~ 43101041 (-)
G2084874 NA non-coding upstream 23059 43110930 ~ 43111637 (-)
G2084891 NA non-coding upstream 55416 43143287 ~ 43144830 (-)
G2084740 LOC106613316 other downstream 302164 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 1406507 41573411 ~ 41680789 (-)
G2083443 NA other downstream 1663159 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 2111992 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2205962 40878111 ~ 40883459 (-)
G2085726 NA other upstream 824289 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1833038 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 2442485 45530356 ~ 45530780 (-)
G2087288 NA other upstream 2709199 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 3884710 46972581 ~ 46975116 (-)

Expression


Co-expression Network