G2085513


Basic Information

Item Value
gene id G2085513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43501034 ~ 43507117 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384905
aaaatacaccttatagaACAATGGGGACTgtaaagcaacacaaacatagataCAGAcaaatgtatacacacacacgataataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatgaaggaggtttaataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagagatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagagatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagagatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggtttaatatcctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactagttcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacttccatgtatatctcactaggtcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtttatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaatctcctccatgtatctctcactaggtcagggtatttaatcCTCCACATATCCACTAGCACCATCATATCCATGATATTCCTGATTTCCTTTAAGTGCATGATGGTtttagtttgtagtgtgatttcatttacggtccatagaggtattttAAACCGTGTTATAATCTCCCACCGTAATAATAGTATTTCATTGCTTGCAGGCTTGATcgattattatttatat
>TU2384906
aaaatacaccttatagaACAATGGGGACTgtaaagcaacacaaacatagataCAGAcaaatgtatacacacacacgataataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatgaaggaggtttaataccctgatctagtgagatatacatggaggaggtttaataccctgacctagtgagacatacatggaggaggtttaataccctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagagatacatggaggaggtttaatatcctgacctagtgagagatacatggaggaggtttaatatcctgacctagtgagatatacatggaggaggtttaatatcctgacctagtgagatatacatggaggtttaatatcctgacctagtgagatatacatggaggaggtttaataccctgacctagtgagtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactagttcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacttccatgtatatctcactaggtcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtttatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctccatgtatatctcactaggtcaggatattaaacctccatgtatatttcactaggtcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctccatgtatatctcactaggtcagggtattaaatctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcaggatattaaacctcctccatgtatctctcactaagtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatctctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcagggtattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcagggtattaaatctcctccatgtatctctcactaggtcagggtatttaatcCTCCACATATCCACTAGCACCATCATATCCATGATATTCCTGATTTCCTTTAAGTGCATGATGGTtttagtttgtagtgtgatttcatttacggtccatagaggtattttAAACCGTGTTATAATCTCCCACCGTAATAATAGTATTTCATTGCTTGCAGGCTTGATcgattattatttatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384905 False 1695 lncRNA 0.40 6 43501034 43507117
TU2384906 True 2516 lncRNA 0.41 5 43501034 43507117

Neighbor

gene id symbol gene type direction distance location
LOC118944772 LOC106581517 coding downstream 851133 42647144 ~ 42649901 (-)
LOC110508058 LOC106581494 coding downstream 936454 42561570 ~ 42564580 (-)
neu4 LOC106581489 coding downstream 960694 42516527 ~ 42540340 (-)
aadac LOC106613299 coding downstream 1215489 42262030 ~ 42285545 (-)
LOC110508063 LOC106581498 coding downstream 1393870 41926917 ~ 42107164 (-)
LOC110508094 tnfaip1 coding upstream 28438 43535555 ~ 43549204 (-)
tmem97 tmem97 coding upstream 49459 43556576 ~ 43558533 (-)
LOC110508089 LOC106581526 coding upstream 229953 43737070 ~ 43762876 (-)
LOC110508088 LOC106581525 coding upstream 262123 43769240 ~ 43783275 (-)
LOC110507241 LOC106581541 coding upstream 755848 44262965 ~ 44310016 (-)
G2085508 NA non-coding downstream 8635 43491907 ~ 43492399 (-)
G2085450 NA non-coding downstream 117729 43382330 ~ 43383305 (-)
G2085444 NA non-coding downstream 125959 43372228 ~ 43375075 (-)
G2085438 LOC106581523 non-coding downstream 147079 43352667 ~ 43353955 (-)
G2085429 NA non-coding downstream 167681 43332909 ~ 43333353 (-)
G2085527 NA non-coding upstream 25165 43532282 ~ 43532650 (-)
G2085532 NA non-coding upstream 34825 43541942 ~ 43542842 (-)
G2085533 NA non-coding upstream 35317 43542434 ~ 43544392 (-)
G2085499 NA non-coding upstream 42150 43549267 ~ 43554070 (-)
G2085557 NA non-coding upstream 78250 43585367 ~ 43585898 (-)
G2084740 LOC106613316 other downstream 715999 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 1820342 41573411 ~ 41680789 (-)
G2083443 NA other downstream 2076994 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 2525827 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2619797 40878111 ~ 40883459 (-)
G2085726 NA other upstream 405043 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1413792 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 2023239 45530356 ~ 45530780 (-)
G2087288 NA other upstream 2289953 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 3465464 46972581 ~ 46975116 (-)

Expression


Co-expression Network