Gene
RNA
| Item | Value |
|---|---|
| gene id | G2085571 |
| gene name | LOC108425843 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 43620516 ~ 43637291 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2384974 | False | 775 | lncRNA | 0.44 | 2 | 43620516 | 43636334 |
| TU2384976 | True | 272 | lncRNA | 0.54 | 3 | 43620516 | 43637291 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem97 | tmem97 | coding | downstream | 61983 | 43556576 ~ 43558533 (-) |
| LOC110508094 | tnfaip1 | coding | downstream | 71312 | 43535555 ~ 43549204 (-) |
| LOC110519585 | LOC106581519 | coding | downstream | 91169 | 43295811 ~ 43529347 (-) |
| LOC118944772 | LOC106581517 | coding | downstream | 970615 | 42647144 ~ 42649901 (-) |
| LOC110508058 | LOC106581494 | coding | downstream | 1055936 | 42561570 ~ 42564580 (-) |
| LOC110508089 | LOC106581526 | coding | upstream | 99779 | 43737070 ~ 43762876 (-) |
| LOC110508088 | LOC106581525 | coding | upstream | 131949 | 43769240 ~ 43783275 (-) |
| LOC110507241 | LOC106581541 | coding | upstream | 625674 | 44262965 ~ 44310016 (-) |
| gbe1b | gbe1 | coding | upstream | 725028 | 44362319 ~ 44721642 (-) |
| rwdd2b | rwdd2b | coding | upstream | 1798430 | 45435721 ~ 45442773 (-) |
| G2085562 | NA | non-coding | downstream | 23549 | 43596050 ~ 43596967 (-) |
| G2085558 | NA | non-coding | downstream | 33427 | 43586806 ~ 43587089 (-) |
| G2085557 | NA | non-coding | downstream | 34618 | 43585367 ~ 43585898 (-) |
| G2085499 | NA | non-coding | downstream | 66446 | 43549267 ~ 43554070 (-) |
| G2085533 | NA | non-coding | downstream | 76124 | 43542434 ~ 43544392 (-) |
| G2085580 | NA | non-coding | upstream | 3740 | 43641031 ~ 43642190 (-) |
| G2085620 | NA | non-coding | upstream | 59293 | 43696584 ~ 43700316 (-) |
| G2085639 | NA | non-coding | upstream | 94112 | 43731403 ~ 43731732 (-) |
| G2085642 | NA | non-coding | upstream | 97091 | 43734382 ~ 43734631 (-) |
| G2084740 | LOC106613316 | other | downstream | 835481 | 42784627 ~ 42785035 (-) |
| LOC118944786 | LOC106581464 | other | downstream | 1939824 | 41573411 ~ 41680789 (-) |
| G2083443 | NA | other | downstream | 2196476 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 2645309 | 40967894 ~ 40977862 (-) |
| LOC110507273 | LOC106581487 | other | downstream | 2739279 | 40878111 ~ 40883459 (-) |
| G2085726 | NA | other | upstream | 274869 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 1283618 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 1893065 | 45530356 ~ 45530780 (-) |
| G2087288 | NA | other | upstream | 2159779 | 45797070 ~ 45798330 (-) |
| ndufc2 | nduc2 | other | upstream | 3335290 | 46972581 ~ 46975116 (-) |
