G2085671


Basic Information

Item Value
gene id G2085671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43817929 ~ 43818456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385121
TAGTAAATCTGTTTTTATTAATCCACTTTCTCACATTATTGCATTTGTGTTGAGGAAAAGTGTATGCATTTCTATACCAACACTTATAAAAACCTGCAATTTTAATAAAAACATACAGAAAACTGACAACTAAGGAACAAAATCTCAGGATAAACTCTGTTTCCCAAGAAAAGAGATGTTGAGATACTATGGTGAGGCAGAACACCCAGACTAGTGTGTTTCATTGGGTGCCTTCTGTCTGTGGTGTGTTTCATTGGGTGCCTGCTGTCTGTGGTGTGTTTCATTGGGTCCCCTGTAGCGGGTGTTACCTGTACATGGGCGGTGGCAGCTCCCTCTGTCTCCATGGCATCCACTCCTCCTCCGTTGTTCAGTCCTCCTGGTTTAGTCAGCTCCTTCACGTCATCTCCC
>TU2385122
TAGTAAATCTGTTTTTATTAATCCACTTTCTCACATTATTGCATTTGTGTTGAGGAAAAGTGTATGCATTTCTATACCAACACTTATAAAAACCTGCAATTTTAATAAAAACATACAGAAAACTGACAACTAAGGAACAAAATCTCAGGATAAACTCTGTTTCCCAAGAAAAGAGATGTTGAGATACTATGGTGAGGCAGAACACCCAGACTAGTGTGTTTCATTGGGTGCCTTCTGTCTGTGGTGTGTTTCATTGGGTGCCTGCTGTCTGTGGTGTGTTTCATTGGGTGCCTGCTGTCTGTGGTGTGTTTCATTGGGTGCCTGCTGTCTGTGGTGTGTTTCATTGGGTCCCCTGTAGCGGGTGTTACCTGTACATGGGCGGTGGCAGCTCCCTCTGTCTCCATGGCATCCACTCCTCCTCCGTTGTTCAGTCCTCCTGGTTTAGTCAGCTCCTTCACGTCATCTCCC

Function

NR:

description
splicing factor, arginine/serine-rich 15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385121 False 408 lncRNA 0.43 2 43817929 43818456
TU2385122 True 468 lncRNA 0.45 2 43817929 43818456

Neighbor

gene id symbol gene type direction distance location
LOC110508088 LOC106581525 coding downstream 34654 43769240 ~ 43783275 (-)
LOC110508089 LOC106581526 coding downstream 55053 43737070 ~ 43762876 (-)
tmem97 tmem97 coding downstream 259396 43556576 ~ 43558533 (-)
LOC110508094 tnfaip1 coding downstream 268725 43535555 ~ 43549204 (-)
LOC110519585 LOC106581519 coding downstream 288582 43295811 ~ 43529347 (-)
LOC110507241 LOC106581541 coding upstream 444509 44262965 ~ 44310016 (-)
gbe1b gbe1 coding upstream 543863 44362319 ~ 44721642 (-)
rwdd2b rwdd2b coding upstream 1617265 45435721 ~ 45442773 (-)
stoml3a LOC104925222 coding upstream 1855045 45673501 ~ 45686113 (-)
slc25a15a LOC106581545 coding upstream 1869498 45687954 ~ 45701584 (-)
G2085659 NA non-coding downstream 25634 43789743 ~ 43792295 (-)
G2085649 NA non-coding downstream 46545 43770832 ~ 43771384 (-)
G2085645 NA non-coding downstream 62988 43754365 ~ 43754941 (-)
G2085642 NA non-coding downstream 83298 43734382 ~ 43734631 (-)
G2085676 NA non-coding upstream 4346 43822802 ~ 43823220 (-)
G2085703 NA non-coding upstream 40278 43858734 ~ 43858959 (-)
G2085722 NA non-coding upstream 89937 43908393 ~ 43909156 (-)
G2085760 NA non-coding upstream 176526 43994982 ~ 43995441 (-)
G2085801 LOC106581535 non-coding upstream 269819 44088275 ~ 44090215 (-)
G2084740 LOC106613316 other downstream 1032894 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 2137237 41573411 ~ 41680789 (-)
G2083443 NA other downstream 2393889 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 2842722 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2936692 40878111 ~ 40883459 (-)
G2085726 NA other upstream 93704 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1102453 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 1711900 45530356 ~ 45530780 (-)
G2087288 NA other upstream 1978614 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 3154125 46972581 ~ 46975116 (-)

Expression


Co-expression Network