Gene
RNA
| Item | Value |
|---|---|
| gene id | G2085852 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 44198194 ~ 44198743 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: spore coat assembly protein ExsA-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2385343 | True | 235 | lncRNA | 0.47 | 2 | 44198194 | 44198743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508088 | LOC106581525 | coding | downstream | 414919 | 43769240 ~ 43783275 (-) |
| LOC110508089 | LOC106581526 | coding | downstream | 435318 | 43737070 ~ 43762876 (-) |
| tmem97 | tmem97 | coding | downstream | 639661 | 43556576 ~ 43558533 (-) |
| LOC110508094 | tnfaip1 | coding | downstream | 648990 | 43535555 ~ 43549204 (-) |
| LOC110519585 | LOC106581519 | coding | downstream | 668847 | 43295811 ~ 43529347 (-) |
| LOC110507241 | LOC106581541 | coding | upstream | 64222 | 44262965 ~ 44310016 (-) |
| gbe1b | gbe1 | coding | upstream | 163576 | 44362319 ~ 44721642 (-) |
| rwdd2b | rwdd2b | coding | upstream | 1236978 | 45435721 ~ 45442773 (-) |
| stoml3a | LOC104925222 | coding | upstream | 1474758 | 45673501 ~ 45686113 (-) |
| slc25a15a | LOC106581545 | coding | upstream | 1489211 | 45687954 ~ 45701584 (-) |
| G2085824 | NA | non-coding | downstream | 57389 | 44139830 ~ 44140805 (-) |
| G2085814 | NA | non-coding | downstream | 79070 | 44116181 ~ 44119124 (-) |
| G2085801 | LOC106581535 | non-coding | downstream | 107979 | 44088275 ~ 44090215 (-) |
| G2085760 | NA | non-coding | downstream | 202753 | 43994982 ~ 43995441 (-) |
| G2085722 | NA | non-coding | downstream | 289038 | 43908393 ~ 43909156 (-) |
| G2085857 | NA | non-coding | upstream | 16527 | 44215270 ~ 44215926 (-) |
| G2085867 | LOC105006673 | non-coding | upstream | 32514 | 44231257 ~ 44232694 (-) |
| G2085875 | NA | non-coding | upstream | 40717 | 44239460 ~ 44239855 (-) |
| G2085897 | NA | non-coding | upstream | 55860 | 44254603 ~ 44254802 (-) |
| G2085902 | NA | non-coding | upstream | 58740 | 44257483 ~ 44258004 (-) |
| G2085726 | NA | other | downstream | 285514 | 43912160 ~ 43912680 (-) |
| G2084740 | LOC106613316 | other | downstream | 1413159 | 42784627 ~ 42785035 (-) |
| LOC118944786 | LOC106581464 | other | downstream | 2517502 | 41573411 ~ 41680789 (-) |
| G2083443 | NA | other | downstream | 2774154 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 3222987 | 40967894 ~ 40977862 (-) |
| G2086783 | NA | other | upstream | 722166 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 1331613 | 45530356 ~ 45530780 (-) |
| G2087288 | NA | other | upstream | 1598327 | 45797070 ~ 45798330 (-) |
| ndufc2 | nduc2 | other | upstream | 2773838 | 46972581 ~ 46975116 (-) |
| G2088345 | NA | other | upstream | 2805122 | 47003865 ~ 47004875 (-) |
