G2087254


Basic Information

Item Value
gene id G2087254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45736656 ~ 45739268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387183
ACTATACTCTCTTTAAAGAATGTCTTCGGTGGGGTAATTGGTATTACCGAAAATAAATACCAAAACTTCGGCAGCCATGCCCTTGTGAAGAGGTTCATTCTACTTTAATGGGAACATTGTTCCATTTAATCTGCTTTCATATTTTTTGAGTAATGGAATAAAGTTATCTTTATATATTTGTCGTCACCTATTAAGCATCATAAGTATTTAATACTTAAAGGATTGCTGTAGGATCCTTAGTTTttattgctgtaaagaaaccactactaaaggacaccaataataagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataagaataagaagaagaagagaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataataataataagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaagaagagaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaatacgaagaagaaaccactactaaaggacaccaataataagaagaaaccactactaaaggacaccaataataagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagagaccactactaaaggacaccaataataagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataataataagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaaaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataataataagaagaaaccactactaaaggacaccaataagaagaagaagagaccactactaaaggacaccaataagaagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaaaccactactaaaggacaccaataagaagaagaaaccactactaaaggacaccaataataagaagaagaagaaaccactactaaaggacaccaataataagaagaagaaaccactactaaaggacaccaataataataagaagaaaccactactaaaggacaccaataataagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaagaaaccactactaaaggacaccaataagaataagaagaaaccactactaaaggacaccaataagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaagaagaaaccactactaaaggacaccaataagaagaagaaaccactactaaaggacaccaataataataagaagaagaaaccactactaaaggacaccaataagtagaaga

Function

NR:

description
dentin sialophosphoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387183 True 2328 lncRNA 0.35 3 45736656 45739268

Neighbor

gene id symbol gene type direction distance location
slc25a15a LOC106581545 coding downstream 35072 45687954 ~ 45701584 (-)
stoml3a LOC104925222 coding downstream 50543 45673501 ~ 45686113 (-)
rwdd2b rwdd2b coding downstream 293883 45435721 ~ 45442773 (-)
gbe1b gbe1 coding downstream 1015014 44362319 ~ 44721642 (-)
LOC110507241 LOC106581541 coding downstream 1426640 44262965 ~ 44310016 (-)
cog6 cog6 coding upstream 272925 46012193 ~ 46197229 (-)
LOC110515379 NA coding upstream 623394 46362662 ~ 46365128 (-)
lpar6a LOC106592078 coding upstream 756284 46409330 ~ 46497886 (-)
rcbtb2 rcbtb2 coding upstream 796933 46536201 ~ 46571673 (-)
LOC118944689 NA coding upstream 1029380 46768648 ~ 46770702 (-)
G2087253 NA non-coding downstream 2261 45733910 ~ 45734395 (-)
G2087234 NA non-coding downstream 30212 45704989 ~ 45706444 (-)
G2087233 NA non-coding downstream 34183 45702242 ~ 45702473 (-)
G2087140 NA non-coding downstream 53669 45682164 ~ 45682987 (-)
G2087132 NA non-coding downstream 69753 45665060 ~ 45666903 (-)
G2087309 NA non-coding upstream 93593 45832861 ~ 45877757 (-)
G2087328 NA non-coding upstream 138704 45877972 ~ 45878517 (-)
G2087332 NA non-coding upstream 141580 45880848 ~ 45881060 (-)
G2087345 NA non-coding upstream 158832 45898100 ~ 45898408 (-)
G2087351 NA non-coding upstream 172331 45911599 ~ 45911862 (-)
G2087090 LOC106593344 other downstream 205876 45530356 ~ 45530780 (-)
G2086783 NA other downstream 815344 44920909 ~ 44921312 (-)
G2085726 NA other downstream 1823976 43912160 ~ 43912680 (-)
G2084740 LOC106613316 other downstream 2951621 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 4055964 41573411 ~ 41680789 (-)
G2087288 NA other upstream 57802 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 1233313 46972581 ~ 46975116 (-)
G2088345 NA other upstream 1264597 47003865 ~ 47004875 (-)
G2088531 NA other upstream 1513407 47252675 ~ 47253186 (-)
G2088739 NA other upstream 1805035 47544303 ~ 47550500 (-)

Expression


Co-expression Network