LOC110508314 (LOC106600507)


Basic Information

Item Value
gene id LOC110508314
gene name LOC106600507
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 970023 ~ 984192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588742.2
AATGGGCTGAATGCCTGGTGGGATACCTATCCATCCAGTCATCAGGAGCCCCTCATGCCATATGGTCCATCCTGATATTGAACATGCTGTAATTATCTTCAACCACCTTTGACTCCGGAGACGAATGCGGGACCCGTAGCCAGTTAACGTTATAATTGTGATTCAAGACAGCTTCTCTCAGCAGCAACCCATGGCTGGCTTCAGGCAAGAGGATGTGGAGGTGTTCTACGATATGGGGGAGGAGCTGGGGAGCGGACAGTTTGCCATCGTACGGAAGTGTAAAGAGAAGCCCTCTGGCTCTGAGTACGCCGCCAAATTCATCAAGAAGCGTCGCCTGTCGTCTAGCCGCCGTGGCGTTAGCCGCGAGGAGATCGAGAGGGAGGTGAACATCCTGAGAGAGATCCAGCACAGCAACATCATAACGCTACACGACATCTTCGAGAACAAGACCGACGTCATCCTTATCCTGGAGCTGGTGTCTGGGGGGGAGCTGTTTGACTTCTTGGCAGAGAAGGAGTCTTTAACAGAGGAGGCTGCCACACAGTTCCTCAAACAGATCCTGGATGGGGTCCACTACCTGCACTCCAAATGCATAGCTCACTTTGAcctcaagCCGGAGAACATTATGCTGCTGGATAAGAATGTTCCCAACCCCAGGATCAAACTCATCGACTTCGGCATCGCTCATCAAATCAAAGCTGGGAACGAGTTTAAAAACATCTTCGGAACGCCAGAGTTCGTTGCTCCAGAGATAGTCAACTATGAACTGCTAGGCCTGGAGGCTGACATGTGGAGTATTGGAGTTATCACATACATTCTGTTGAGTGGTGCCTCTCCGTTCCTGGGGGAGACCAAGCAGGAGACTCTGACCAACATCTCAGCAGTCAACTATGACTTTGACGAGGAGTACTTCAGCAACACTAGTGAGTTGGCCAAGGACTTCATCAGACGGCTGCTGGTCAAGGATCCCAAGAAGAGAATGACCATCGATGACAGCCTTCAGCATCCCTGGATCAAGGTGATCAAGAGGCGAAACGTGCGCCAGGAGGAGAGCGGAAAGAAGCCGGAGCGCAGGCGCCTGAAGACAACGCGTCTAAAGGAGTACACCATCAAGTCCCACTCCTCCATGCCCCCCAACAACACCTACGTCAACTTTGAACGCTTCTCCCAGGTGCTGGAGGAGATCGCTGCTGCCGAGGAGGGGCTGAGAGACCTGGAGCACAACCAGAGGTCATGTCAGGAGGACGTGGCTGCTCTACTCTCTATCTATGAGGAGAAGGAGGGCTGGTACAAGGAGGAGAACCAGAGCATCGCCAGCAACCTGGATCACATCCGCCAGGCTCTGCAGTGTACCCAGGCCCAGCGCAGGCAGAGTCAGGAGGATGCCCGCGCCGCCATGCTGGCTGCTAACGCACTCAAGAGGACGTTTGGGCGCCTGGAGAACCGCTACGAGGTCCTGGCGGAGCAGGTGGCGTCGGAGGTGCGCTGGGTGGAGGAGCTGgtcagagggatagagagggagaaagacagtctGGTCATGCCCTGAGACCTGGCTCCAGCTTGGCTTGTAGAATAGTCCTGAGCCTGGCCTGCCTTCTAGAATCAATGACATTATTCTCATAGAATCACTGACATTAGTCTGAATCTACGCTCTTCAGTTTCTTCTTTCTAGGGCGGTCTGGTCATGGCCGATAGGCAAAGTCCTACCGGGCTGGGGCTGGAGTCACTGAATTACATTATTCTAGTTCTCAGCTTACTTCCTACTatgtccatgtctgtgtgtgtgtatggtacagtcaggacAGTACATGTACACCAGCTCTCAGAGTTTTTCTGGTGTTGGTGTGGTTGTTGGAATCACAGACATTACTCTGCTTCTGCACTCTCAGCTTCttctttgtctgtgtgtttgtggcaCGAACAGGGCACATATTCTACACCAGCTGTCATCAGATTCAGAATGAGGGTCCAGAGTTCTTCGGGTTAGAGAAAACGCTGGGCCCCCGATCATAATCCATGCTGCCCCTCACACACATTTGATTGGGAAAAAGGTTACTCCTCCTGTATCACTTTGTATGGAGAGAACTAGCAACGTAGAGTCCTTATTATGAATATGTTCGGTCAACAAAATATGTGTTTAATAATACATTTTCTAAATAAATGTTTAATGTTGAAGATAAGGATTTTGATTGTTATACGCAATACTGACACATTGTAAAATACGCTGTTCGTTTTTGCAGTATATTTGGTTATGATTTGGTTTTCTGCACCGGCAATCATTTTCCTAAAGAGTTTTAAGCTCCATAGTTGAAGAAATACATGGTATATGCACCTGTGTGACAGCCTTAGTCTGGCTTGGTATGTCAATTTTAAGTACGCAATCATAACATGTATCATTCACAGCTGACTGTTATAAGTAACAACATAGTACAAATTGCACAGAAATAACAGGAAATTCATGTTGATGTATTATAGGGAGATCTCAGTACTTCATCTTATTGACAGTAGGCTATCTATTCTATACCATATGTCACTCAGCTGACTTGTTGTACTGTGATGCAAATGAAACAAATGCAAACACTATAGCTGTCTTACCTAAGGAGAGAGTAGTCTTAAAATATATAGATTGTATAAACCTGTTTTGCTCTTTGTACGCTGTGCCTGGATATAGAACACCTTATTGCCTATACATAAGCAAAAACAAATTTGTAGTAATGGTTAGACATGTTAGTGAAAATACAGGCTTAGTTGCTGTCCCTCAAAACGCTTTGGGCCAGTTTCCTGGAtaaaaacatgctcaatggaagTTGTACATTGAATTTGGTTTTTAGCCCaggaccaggcttaatctgtgtctgggaaactgcccCGTTTGAGTACAACTATTGTACATAAGATTCTTCCCAAATGATCTGCATGATGTTAAACTATGTAAagtataaaacatatatattttttcattacGACCATAATAACCCACACACTTCAGACATTCCACGAGTTAGTCATTAAATCTATGCATCACATTCCATGTTCACCATAAAACTATAGAACCCTATATACTGTGTAATTCCCTCGTTTAATATTCTCATTTGCACTTAAGAATACAGCAGTGTTCCAAACTATCTCCCACTGAATTATTTTAATGTTTGCAAAATGTATAATTGGTATGTATTTATTGGTTTGAACAGTTTTAGACAGGTTTGTGTTTTAAATAAACAAGCTTAAATACATGTAGCTTAA
>XM_021588743.2
TTATTGTGATTAAATTacataattttttaaataaaagtgcCATTTTACACAAACGTTAGCGTTTGCTTCGAATGCCGACCGTGTGTATGACAAGCACAGCTAGCATGCAGCGATTGCTAAATTGGATAGCAAGACTGGCTAATTGTGATTCAAGACAGCTTCTCTCAGCAGCAACCCATGGCTGGCTTCAGGCAAGAGGATGTGGAGGTGTTCTACGATATGGGGGAGGAGCTGGGGAGCGGACAGTTTGCCATCGTACGGAAGTGTAAAGAGAAGCCCTCTGGCTCTGAGTACGCCGCCAAATTCATCAAGAAGCGTCGCCTGTCGTCTAGCCGCCGTGGCGTTAGCCGCGAGGAGATCGAGAGGGAGGTGAACATCCTGAGAGAGATCCAGCACAGCAACATCATAACGCTACACGACATCTTCGAGAACAAGACCGACGTCATCCTTATCCTGGAGCTGGTGTCTGGGGGGGAGCTGTTTGACTTCTTGGCAGAGAAGGAGTCTTTAACAGAGGAGGCTGCCACACAGTTCCTCAAACAGATCCTGGATGGGGTCCACTACCTGCACTCCAAATGCATAGCTCACTTTGAcctcaagCCGGAGAACATTATGCTGCTGGATAAGAATGTTCCCAACCCCAGGATCAAACTCATCGACTTCGGCATCGCTCATCAAATCAAAGCTGGGAACGAGTTTAAAAACATCTTCGGAACGCCAGAGTTCGTTGCTCCAGAGATAGTCAACTATGAACTGCTAGGCCTGGAGGCTGACATGTGGAGTATTGGAGTTATCACATACATTCTGTTGAGTGGTGCCTCTCCGTTCCTGGGGGAGACCAAGCAGGAGACTCTGACCAACATCTCAGCAGTCAACTATGACTTTGACGAGGAGTACTTCAGCAACACTAGTGAGTTGGCCAAGGACTTCATCAGACGGCTGCTGGTCAAGGATCCCAAGAAGAGAATGACCATCGATGACAGCCTTCAGCATCCCTGGATCAAGGTGATCAAGAGGCGAAACGTGCGCCAGGAGGAGAGCGGAAAGAAGCCGGAGCGCAGGCGCCTGAAGACAACGCGTCTAAAGGAGTACACCATCAAGTCCCACTCCTCCATGCCCCCCAACAACACCTACGTCAACTTTGAACGCTTCTCCCAGGTGCTGGAGGAGATCGCTGCTGCCGAGGAGGGGCTGAGAGACCTGGAGCACAACCAGAGGTCATGTCAGGAGGACGTGGCTGCTCTACTCTCTATCTATGAGGAGAAGGAGGGCTGGTACAAGGAGGAGAACCAGAGCATCGCCAGCAACCTGGATCACATCCGCCAGGCTCTGCAGTGTACCCAGGCCCAGCGCAGGCAGAGTCAGGAGGATGCCCGCGCCGCCATGCTGGCTGCTAACGCACTCAAGAGGACGTTTGGGCGCCTGGAGAACCGCTACGAGGTCCTGGCGGAGCAGGTGGCGTCGGAGGTGCGCTGGGTGGAGGAGCTGgtcagagggatagagagggagaaagacagtctGGTCATGCCCTGAGACCTGGCTCCAGCTTGGCTTGTAGAATAGTCCTGAGCCTGGCCTGCCTTCTAGAATCAATGACATTATTCTCATAGAATCACTGACATTAGTCTGAATCTACGCTCTTCAGTTTCTTCTTTCTAGGGCGGTCTGGTCATGGCCGATAGGCAAAGTCCTACCGGGCTGGGGCTGGAGTCACTGAATTACATTATTCTAGTTCTCAGCTTACTTCCTACTatgtccatgtctgtgtgtgtgtatggtacagtcaggacAGTACATGTACACCAGCTCTCAGAGTTTTTCTGGTGTTGGTGTGGTTGTTGGAATCACAGACATTACTCTGCTTCTGCACTCTCAGCTTCttctttgtctgtgtgtttgtggcaCGAACAGGGCACATATTCTACACCAGCTGTCATCAGATTCAGAATGAGGGTCCAGAGTTCTTCGGGTTAGAGAAAACGCTGGGCCCCCGATCATAATCCATGCTGCCCCTCACACACATTTGATTGGGAAAAAGGTTACTCCTCCTGTATCACTTTGTATGGAGAGAACTAGCAACGTAGAGTCCTTATTATGAATATGTTCGGTCAACAAAATATGTGTTTAATAATACATTTTCTAAATAAATGTTTAATGTTGAAGATAAGGATTTTGATTGTTATACGCAATACTGACACATTGTAAAATACGCTGTTCGTTTTTGCAGTATATTTGGTTATGATTTGGTTTTCTGCACCGGCAATCATTTTCCTAAAGAGTTTTAAGCTCCATAGTTGAAGAAATACATGGTATATGCACCTGTGTGACAGCCTTAGTCTGGCTTGGTATGTCAATTTTAAGTACGCAATCATAACATGTATCATTCACAGCTGACTGTTATAAGTAACAACATAGTACAAATTGCACAGAAATAACAGGAAATTCATGTTGATGTATTATAGGGAGATCTCAGTACTTCATCTTATTGACAGTAGGCTATCTATTCTATACCATATGTCACTCAGCTGACTTGTTGTACTGTGATGCAAATGAAACAAATGCAAACACTATAGCTGTCTTACCTAAGGAGAGAGTAGTCTTAAAATATATAGATTGTATAAACCTGTTTTGCTCTTTGTACGCTGTGCCTGGATATAGAACACCTTATTGCCTATACATAAGCAAAAACAAATTTGTAGTAATGGTTAGACATGTTAGTGAAAATACAGGCTTAGTTGCTGTCCCTCAAAACGCTTTGGGCCAGTTTCCTGGAtaaaaacatgctcaatggaagTTGTACATTGAATTTGGTTTTTAGCCCaggaccaggcttaatctgtgtctgggaaactgcccCGTTTGAGTACAACTATTGTACATAAGATTCTTCCCAAATGATCTGCATGATGTTAAACTATGTAAagtataaaacatatatattttttcattacGACCATAATAACCCACACACTTCAGACATTCCACGAGTTAGTCATTAAATCTATGCATCACATTCCATGTTCACCATAAAACTATAGAACCCTATATACTGTGTAATTCCCTCGTTTAATATTCTCATTTGCACTTAAGAATACAGCAGTGTTCCAAACTATCTCCCACTGAATTATTTTAATGTTTGCAAAATGTATAATTGGTATGTATTTATTGGTTTGAACAGTTTTAGACAGGTTTGTGTTTTAAATAAACAAGCTTAAATACATGTAGCTTAA

Function

NR:

description
death-associated protein kinase 3-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08803 DAPK; death-associated protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588742.2 False 3243 mRNA 0.46 11 970023 984192
XM_021588743.2 True 3230 mRNA 0.45 11 970196 984192

Neighbor

gene id symbol gene type direction distance location
LOC110508313 lsm7 coding upstream 15689 947539 ~ 954335 (+)
LOC110508311 LOC106600508 coding upstream 73741 874311 ~ 896282 (+)
LOC100136604 LOC106600510 coding upstream 111917 733004 ~ 858106 (+)
LOC118944813 mfsd14a coding upstream 265757 678025 ~ 704266 (+)
LOC110508307 LOC106600513 coding upstream 289580 603317 ~ 680443 (+)
LOC110508203 LOC106600526 coding downstream 264 984456 ~ 986592 (+)
LOC110508316 LOC106600506 coding downstream 12750 996942 ~ 1004291 (+)
prkci LOC106600503 coding downstream 52330 1036522 ~ 1107598 (+)
LOC110509188 LOC106600502 coding downstream 141632 1125824 ~ 1160925 (+)
LOC110509189 LOC106600499 coding downstream 259776 1243968 ~ 1317532 (+)
G2093326 NA non-coding upstream 3775 966011 ~ 966248 (+)
G2093321 NA non-coding upstream 7499 962267 ~ 962524 (+)
G2093319 NA non-coding upstream 8437 961338 ~ 961586 (+)
G2092684 NA non-coding upstream 12198 957612 ~ 957825 (+)
G2092683 NA non-coding upstream 12627 957078 ~ 957396 (+)
G2093363 NA non-coding downstream 31884 1016076 ~ 1016542 (+)
G2093365 NA non-coding downstream 33341 1017533 ~ 1017760 (+)
G2093378 NA non-coding downstream 46183 1030375 ~ 1030794 (+)
G2093500 NA non-coding downstream 130507 1114699 ~ 1114995 (+)
G2093631 NA non-coding downstream 237639 1221831 ~ 1222188 (+)
G2092558 NA other upstream 275365 694133 ~ 694658 (+)
G2093889 NA other downstream 460441 1444633 ~ 1446121 (+)
G2093960 mpz other downstream 699914 1684106 ~ 1696486 (+)
LOC110509192 LOC106600604 other downstream 1109952 2094076 ~ 2190557 (+)
G2094884 NA other downstream 1669671 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 1916658 2900784 ~ 2969598 (+)

Expression


Co-expression Network