LOC110508203 (LOC106600526)


Basic Information

Item Value
gene id LOC110508203
gene name LOC106600526
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 984456 ~ 986592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588637.2
TATTTCTACAAGTAGTTGGCATGTGAACAACCTTCTACAAAaggatttgtttaaaaagtaGTGAGATGGAATGTGCAGTGATGAGCGTGGAGTGTACTGTACACTAGTCCTGGCATGATAAAataaacacagagaggctgctagGATTCTTCCTTTATAAAAGCATTCTAACTAAGATGTGGTGAAAGACTGGGTATTGGTTTTAAAGGGGATATTTGGACAAAGCGCAACCACAGCTCCCTTCAACACCATGGCTCGTTCCAAGAGTTCCAAGTCATCCGGGACCTGCTGTAACCTGGTGATGGCACTGCTGACCCTGTGGTCCATGGTCTCCCTCATCGTTATCGTGGTGTGGGCCACCTCTCCTCACATGAAGGGCGTGGCCCAGTGCAACGTAGCCCAACAGTCCCTGACGGAGAAGATGGAAGGGGCGAAGGTTGTGTGGGAGAAGGAAAAGCAGGCCTTGCTGGAGTCTGTAAGGCTGAGCCAGGAGAACCAAACCACACTGCAGCGGGAGATGGAGGTTGTcgctgagagactgagagagaattACGTGTCCCTGAGCCTCAGCCTGCAGGAGAATGCGATGCTGCATGCGAATGAAACAGCACAAAGGAGTGCTATTTCCCtgcacagagatacacagagaaatATGTCCCTAGATCTGAGTCTACAGAGAGACCATTTTGAGTGGTTACGATTCAACTTCACCCAAGCTGTCCACCAGTCCCACTCCTGCTCTGCTTCATGTGATGCTTCAAATAGCCAGGCGGTGGCAGCAATGAGTCAAATGCAAGCCTGCGAGTCCAGCAAACACTATATGATGACACAAATGGAAAGAAGAGGTTGCAAGATCAATGGATTGTCATCCAGTGCTTTTTGACTGTGAGGAGAGATATATGAGGGCCTCATTGTTAATCTGAAGGGTTTATTAATTAATGTGATTAACACATACTTATTTCACCGTGCTCTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588637.2 True 974 mRNA 0.47 7 984456 986592

Neighbor

gene id symbol gene type direction distance location
LOC110508314 LOC106600507 coding upstream 264 970023 ~ 984192 (+)
LOC110508313 lsm7 coding upstream 30122 947539 ~ 954335 (+)
LOC110508311 LOC106600508 coding upstream 88174 874311 ~ 896282 (+)
LOC100136604 LOC106600510 coding upstream 126350 733004 ~ 858106 (+)
LOC118944813 mfsd14a coding upstream 280190 678025 ~ 704266 (+)
LOC110508316 LOC106600506 coding downstream 10350 996942 ~ 1004291 (+)
prkci LOC106600503 coding downstream 49930 1036522 ~ 1107598 (+)
LOC110509188 LOC106600502 coding downstream 139232 1125824 ~ 1160925 (+)
LOC110509189 LOC106600499 coding downstream 257376 1243968 ~ 1317532 (+)
LOC110508321 LOC106600497 coding downstream 416135 1402727 ~ 1414817 (+)
G2093326 NA non-coding upstream 18208 966011 ~ 966248 (+)
G2093321 NA non-coding upstream 21932 962267 ~ 962524 (+)
G2093319 NA non-coding upstream 22870 961338 ~ 961586 (+)
G2092684 NA non-coding upstream 26631 957612 ~ 957825 (+)
G2092683 NA non-coding upstream 27060 957078 ~ 957396 (+)
G2093363 NA non-coding downstream 29484 1016076 ~ 1016542 (+)
G2093365 NA non-coding downstream 30941 1017533 ~ 1017760 (+)
G2093378 NA non-coding downstream 43783 1030375 ~ 1030794 (+)
G2093500 NA non-coding downstream 128107 1114699 ~ 1114995 (+)
G2093631 NA non-coding downstream 235239 1221831 ~ 1222188 (+)
G2092558 NA other upstream 289798 694133 ~ 694658 (+)
G2093889 NA other downstream 458041 1444633 ~ 1446121 (+)
G2093960 mpz other downstream 697514 1684106 ~ 1696486 (+)
LOC110509192 LOC106600604 other downstream 1107552 2094076 ~ 2190557 (+)
G2094884 NA other downstream 1667271 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 1914258 2900784 ~ 2969598 (+)

Expression


Co-expression Network