phc3 (phc3)


Basic Information

Item Value
gene id phc3
gene name phc3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 1005888 ~ 1029028 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588746.2
CCGTTTGTTTTTCTCTCCATTTTAGCATTACAGACTTGACGCATTAGAACATGACTGGGATTGTGACAGTCTGAACCGGTGGGTTTTCGTTCGGTCACTTCGCCATGGGTCAGGTCTAATAACAAATCCAGCCAGTTGGCCCAGTGATACAGACCGTAGCTTAGATTTACCAGCAGCATGATGGACAGGCAGAGCCCTaaaaagacagagggaggaggagagagtgagaccaATGGGACTGCTGCTACTGTCACTGTCACCTCTAACACCAAAGCAGTTACAACGGTTGCCAACAACAACGTCGCTGCTTCAGTGGTCATCGCCATGACGACAACCGACAGCACCACGCCCCCAAGCAGTCAGGCCCCACCCACTTCTCTAGGCACCGCCCCTACAGAGAGCCAGGCAGTTCAGgtgATCCAGCAGGCCACCCACAGCAGGCCCCAGACCATGGCAGCTCAGTACCTGCAGCAGATGTACGCGGCCCAGCAGCAACACATCATCCTGCAGACAGCTGCGCTGCAGCAGCAACAGCCTTACTGTAGCAGACAGTCCCCCTCCTTACCCTCTGCTGCCAACAACACGGTGCCCCAGTCAACTGGTACCTCTatccccctcccagcctctccAGTAACAGGCCAGCTGATTGGTCATTCTCAGAGTTCCAGCTCCACCACAGGCACGATTACCCAGCAGGCCATGCTCCTGGGGAATTGCTCTGCTTCCTGTAACCAAGCCCAGATGTACCTTCGCACCCAGATGTTGATTCTGACCCCTGCGGCCACGGTGGCAGCAGTCCAGTCTGACCTGCCTTCTGTCTGCTGCAGCTCCTCTCAACTCTCCACTTCACAGgtcCACAGCCTTGCTGTGCAGGCCCATCTCCCAGGGGCTTTGGCCACTGCCCAGAGTGTCCTGTTGAAGCCATTCTCCACCCAGCCCCAGACGCTGGTCTCCTCTCTGCCCAAGATGTCCATCTGTCCCCTGAGGTCCAGTCAGCAATCTGACCCCTCCACAGAAGCCTCTGGAGCTAAGCCTCGGCTGGCTGACATCACCAGGCTAACATCAGCAAACCAGCTTATCGCGCCTGCGTCGTACACTCCTGTCCAGTCCCATGCTGTGGTCAGGCACCAGCTGCACTGTCCTCCGAGCCATAAGGGGGCACCCCACCAGCTCATCATCcagcagaccacagcaggatcCCACCGGCAGCTGCACCCTATCGCACTGCGCCTCGCACCCCAAgacacttccccctctctcttccctcttaccCTCCAGCCCCTGGCCACTCccacccacaccaccaccactgtcCAATCCCAGCCTGGCGATGGCcttccagtcctctcctcttcctgtgagctgcccaccccaccccctccccagCAGACAGTGGTAGTATCCTCATCAGCCCCTCCACCTCTTCTGTGTCCCAGCCtgctccagccccagctccacCGCCAGCCCAAGCCCCCTACCCTGCGTCTTGGCCCCATCTCCCAGGCGTCTCTCCCCAGGCTGGTCCAGTCTCCACCGGCCTCCCTCCAGAGGTTGTCCCTGCGCTCAGTCCAGGCCCTGGCAGTGCAGTCCACTGGGGTTCAGGTGTCGGAGGAGCTGCCTGTGGCAGAGGCGCCGGTCCAGATGCCTTTTCAGAACCATCACCCCCCCCAGACGTTCCAGAATCTATCCCAGACGTTCCAGAATCTCTCCCCACCCCAGACTGTAGCTGTGGACCTGAAGATGCTTCCAGCCACCCTACGCACCCAGactccagagaggagagaggagatgagagcgGAGAGGACGACCCCTCCACCCACACTCTCTCCATTGGCTTGTTCAGACAGACTCTGTAAAGACATACAGCTCACCTTTACAGAGAACTGCACTGGCAGGTTGGATTTCCCCTGCGTTCCTCCGCTCAGCCGCTCCGTTACCCACTCGTCTCAAGACCCCTCTTACACCAGctgctcccctcctccactcctgccCTCGGCCGCGGTAAGAAGCCACGGCCAATCCCCCTCAGCCACCCTTCCAGGGAGCCCTGAGAGAGCTAGACCTCTCATCCTCACTCACATCATAGAGGGGTTCGTCGTCAGAGAGGCCCTGCAGCCGTTCCTCCCGATATGTCCACTGATGGGCCGTTCCTCTTTGGGGGCAGACCAGCAGGCCACGCTTCCTGAAGCCCGGGAGGTGagaaccaatggggatccaacACTTGAGATGAGAACCAATAAGGATTCAGCTATAGAATTGAGAACCAATGTGGATCGAGTGCCAGAGGAGAGCCTGATGGATGCTGAGCAGCCAGACAATGACTCAGACATGGATGATACCCCCACCCAGGACGAACCTGCTGCTGAGAGCTTGGTAGATGTGCTGCAGTGTGAGTTCTGTGGGAAGAGGGGCTACGTTCACACCTTCCTCCGATCCAAACGATTCTGCTCCATGACCTGTGTCAAGAGGTTCAATGTGAGCTGTACAAAGCGTCTGAGCGTGTTGAAGGTGGACAAGGCCAGTCGTTGGGGCCACAGGCCGATGGGCCGTAGAGGACGTCCCTCGGGGAGGGTCAACGGGGGCACCAGAGAACACTTCCTCCTCAGACAGGTGCAGGGGCCGTACGGTTCTGAAGAGACCCAGAGAACAttgaggggggaagaggaggctGAGGATGAGCCCCCTGTCCCCATGATCACCAGGCTGCGCcggcaggaagagagggagagggtgcaggagagagagagggagcagggaagACAGAGGAAAGACACATTCATATCCTCTGGTGAACAGACCACAGGAGGTCAAGAATGTAGTGACAATCCAACACAGTGGAGCGTGGGTCAAGTCTGCTCCTACATCAACTCTCTACCAGGTGGGCGGGACATATCAGAGGAGTTCCGTTCCCACGAGATTGACGGCCAGGCCCTCCTATTGCTGACAGAGGACCACCTGATGACAGCGATGAACATCAAACTAGGACCCGCCCTCAAACTCTGTGCCCACATCAACTCTCTGAAGGAACCATGAGCACAGGACAGGGCCCATCTGGTCAAAAATAGGGTACTATATAGGAGATGCGAACGGGAGGAGCACCCTTATCAGACTTAGAGGATATGAGATTCTTAGAAATGACACACAAACAAATATACTTGCTCTCTACCTTAACTCTTTGAGAAGCAGCGAGTTAACTGTTCATCTGTGTGTCAGTCATCATTCAACACATTAACAACCATCTATCATCGTAGTGATTGTAGCAATAAGGCTCAAGGTGGCCTTTTTTCTGTGTTACATTGTAAGTACTGTACATGGTGTTTAAACTTAAGTTTAAAGAATTGTATTTAAATGTTTTCAAAATGTTATTCTCTGAAGACCGTTTTCCAAGCCTGAGAGGAGTTGGCATTTAACAATGACTCAGtatgtgccccaaatggcaccctattccttagtgcgctacttttgaccaggacccataaggctctggtcaaaagtagtggactatatagggaatatggtgccatttgggatgtatccaGATTGACTGAAGTTGCATATGAGGAAATCCACTTCCAACCCGTGCAGCATAGCAACTGCAGAGCAACCAGGAAGTGCCTTGTGAATTCCAAGGTTGAGACATTAGATCAAGTAACATGTTTATTACTGCTATAATAAATacaccaaaatatatatatataaacgcaacatgtaaagtgttggtcacatgtttcatgagctgaaataaaagatcactgAAATgttccactcacacacacagcttatttctctcaaattctgtgcactaattt
>XM_021588749.2
CCGTTTGTTTTTCTCTCCATTTTAGCATTACAGACTTGACGCATTAGAACATGACTGGGATTGTGACAGTCTGAACCGGTGGGTTTTCGTTCGGTCACTTCGCCATGGGTCAGGTCTAATAACAAATCCAGCCAGTTGGCCCAGTGATACAGACCGTAGCTTAGATTTACCAGCAGCATGATGGACAGGCAGAGCCCTaaaaagacagagggaggaggagagagtgagaccaATGGGACTGCTGCTACTGTCACTGTCACCTCTAACACCAAAGCAGTTACAACGGTTGCCAACAACAACGTCGCTGCTTCAGTGGTCATCGCCATGACGACAACCGACAGCACCACGCCCCCAAGCAGTCAGGCCCCACCCACTTCTCTAGGCACCGCCCCTACAGAGAGCCAGGCAGTTCAGgtgATCCAGCAGGCCACCCACAGCAGGCCCCAGACCATGGCAGCTCAGTACCTGCAGCAGATGTACGCGGCCCAGCAGCAACACATCATCCTGCAGACAGCTGCGCTGCAGCAGCAACAGCCTTACTGTAGCAGACAGTCCCCCTCCTTACCCTCTGCTGCCAACAACACGGTGCCCCAGTCAACTGGTACCTCTatccccctcccagcctctccAGTAACAGGCCAGCTGATTGGTCATTCTCAGAGTTCCAGCTCCACCACAGGCACGATTACCCAGCAGGCCATGCTCCTGGGGAATTGCTCTGCTTCCTGTAACCAAGCCCAGATGTACCTTCGCACCCAGATGTTGATTCTGACCCCTGCGGCCACGGTGGCAGCAGTCCAGTCTGACCTGCCTTCTGTCTGCTGCAGCTCCTCTCAACTCTCCACTTCACAGgtcCACAGCCTTGCTGTGCAGGCCCATCTCCCAGGGGCTTTGGCCACTGCCCAGAGTGTCCTGTTGAAGCCATTCTCCACCCAGCCCCAGACGCTGGTCTCCTCTCTGCCCAAGATGTCCATCTGTCCCCTGAGGTCCAGTCAGCAATCTGACCCCTCCACAGAAGCCTCTGGAGCTAAGCCTCGGCTGGCTGACATCACCAGGCTAACATCAGCAAACCAGCTTATCGCGCCTGCGTCGTACACTCCTGTCCAGTCCCATGCTGTGGTCAGGCACCAGCTGCACTGTCCTCCGAGCCATAAGGGGGCACCCCACCAGCTCATCATCcagcagaccacagcaggatcCCACCGGCAGCTGCACCCTATCGCACTGCGCCTCGCACCCCAAgacacttccccctctctcttccctcttaccCTCCAGCCCCTGGCCACTCccacccacaccaccaccactgtcCAATCCCAGCCTGGCGATGGCcttccagtcctctcctcttcctgtgagctgcccaccccaccccctccccagCAGACAGTGGTAGTATCCTCATCAGCCCCTCCACCTCTTCTGTGTCCCAGCCtgctccagccccagctccacCGCCAGCCCAAGCCCCCTACCCTGCGTCTTGGCCCCATCTCCCAGGCGTCTCTCCCCAGGCTGGTCCAGTCTCCACCGGCCTCCCTCCAGAGGTTGTCCCTGCGCTCAGTCCAGGCCCTGGCAGTGCAGTCCACTGGGGTTCAGGTGTCGGAGGAGCTGCCTGTGGCAGAGGCGCCGGTCCAGATGCCTTTTCAGAACCATCACCCCCCCCAGACGTTCCAGAATCTATCCCAGACGTTCCAGAATCTCTCCCCACCCCAGACTGTAGCTGTGGACCTGAAGATGCTTCCAGCCACCCTACGCACCCAGactccagagaggagagaggagatgagagcgGAGAGGACGACCCCTCCACCCACACTCTCTCCATTGGCTTGTTCAGACAGACTCTGTAAAGACATACAGCTCACCTTTACAGAGAACTGCACTGGCAGGTTGGATTTCCCCTGCGTTCCTCCGCTCAGCCGCTCCGTTACCCACTCGTCTCAAGACCCCTCTTACACCAGctgctcccctcctccactcctgccCTCGGCCGCGATGGGCCGTTCCTCTTTGGGGGCAGACCAGCAGGCCACGCTTCCTGAAGCCCGGGAGGTGagaaccaatggggatccaacACTTGAGATGAGAACCAATAAGGATTCAGCTATAGAATTGAGAACCAATGTGGATCGAGTGCCAGAGGAGAGCCTGATGGATGCTGAGCAGCCAGACAATGACTCAGACATGGATGATACCCCCACCCAGGACGAACCTGCTGCTGAGAGCTTGGTAGATGTGCTGCAGTGTGAGTTCTGTGGGAAGAGGGGCTACGTTCACACCTTCCTCCGATCCAAACGATTCTGCTCCATGACCTGTGTCAAGAGGTTCAATGTGAGCTGTACAAAGCGTCTGAGCGTGTTGAAGGTGGACAAGGCCAGTCGTTGGGGCCACAGGCCGATGGGCCGTAGAGGACGTCCCTCGGGGAGGGTCAACGGGGGCACCAGAGAACACTTCCTCCTCAGACAGGTGCAGGGGCCGTACGGTTCTGAAGAGACCCAGAGAACAttgaggggggaagaggaggctGAGGATGAGCCCCCTGTCCCCATGATCACCAGGCTGCGCcggcaggaagagagggagagggtgcaggagagagagagggagcagggaagACAGAGGAAAGACACATTCATATCCTCTGGTGAACAGACCACAGGAGGTCAAGAATGTAGTGACAATCCAACACAGTGGAGCGTGGGTCAAGTCTGCTCCTACATCAACTCTCTACCAGGTGGGCGGGACATATCAGAGGAGTTCCGTTCCCACGAGATTGACGGCCAGGCCCTCCTATTGCTGACAGAGGACCACCTGATGACAGCGATGAACATCAAACTAGGACCCGCCCTCAAACTCTGTGCCCACATCAACTCTCTGAAGGAACCATGAGCACAGGACAGGGCCCATCTGGTCAAAAATAGGGTACTATATAGGAGATGCGAACGGGAGGAGCACCCTTATCAGACTTAGAGGATATGAGATTCTTAGAAATGACACACAAACAAATATACTTGCTCTCTACCTTAACTCTTTGAGAAGCAGCGAGTTAACTGTTCATCTGTGTGTCAGTCATCATTCAACACATTAACAACCATCTATCATCGTAGTGATTGTAGCAATAAGGCTCAAGGTGGCCTTTTTTCTGTGTTACATTGTAAGTACTGTACATGGTGTTTAAACTTAAGTTTAAAGAATTGTATTTAAATGTTTTCAAAATGTTATTCTCTGAAGACCGTTTTCCAAGCCTGAGAGGAGTTGGCATTTAACAATGACTCAGtatgtgccccaaatggcaccctattccttagtgcgctacttttgaccaggacccataaggctctggtcaaaagtagtggactatatagggaatatggtgccatttgggatgtatccaGATTGACTGAAGTTGCATATGAGGAAATCCACTTCCAACCCGTGCAGCATAGCAACTGCAGAGCAACCAGGAAGTGCCTTGTGAATTCCAAGGTTGAGACATTAGATCAAGTAACATGTTTATTACTGCTATAATAAATacaccaaaatatatatatataaacgcaacatgtaaagtgttggtcacatgtttcatgagctgaaataaaagatcactgAAATgttccactcacacacacagcttatttctctcaaattctgtgcactaattt

Function

symbol description
phc3 Orthologous to human PHC3 (polyhomeotic homolog 3).

NR:

description
polyhomeotic-like protein 3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588746.2 False 3809 mRNA 0.54 13 1005888 1029028
XM_021588749.2 True 3671 mRNA 0.54 13 1005888 1029028

Neighbor

gene id symbol gene type direction distance location
LOC118944809 NA coding downstream 14540 988785 ~ 991348 (-)
LOC110508312 sppl2b coding downstream 58515 897589 ~ 947373 (-)
LOC110508306 LOC106600515 coding downstream 422464 555687 ~ 583424 (-)
LOC110508302 LOC106587021 coding downstream 776296 181782 ~ 229592 (-)
LOC110508204 LOC106600525 coding upstream 176747 1205775 ~ 1208298 (-)
LOC110508319 LOC106600498 coding upstream 318736 1347764 ~ 1353801 (-)
LOC110508320 NA coding upstream 364238 1393266 ~ 1394586 (-)
LOC110508322 LOC106600495 coding upstream 429184 1458212 ~ 1562320 (-)
LOC110509191 LOC106600493 coding upstream 542462 1571490 ~ 1640448 (-)
G2093316 NA non-coding downstream 48525 957065 ~ 957363 (-)
G2093310 lsm7 non-coding downstream 51565 952931 ~ 954323 (-)
G2093247 NA non-coding downstream 81564 861441 ~ 924324 (-)
G2093245 NA non-coding downstream 93437 858962 ~ 912451 (-)
G2093490 NA non-coding upstream 76374 1105402 ~ 1107594 (-)
G2093491 NA non-coding upstream 79174 1108202 ~ 1108464 (-)
G2093504 NA non-coding upstream 89548 1118576 ~ 1118819 (-)
G2093509 NA non-coding upstream 93791 1122819 ~ 1123057 (-)
G2093510 NA non-coding upstream 95013 1124041 ~ 1124371 (-)
G2092886 NA other downstream 670949 334529 ~ 334939 (-)
G2093433 NA other upstream 6400 1035428 ~ 1035674 (-)
G2093581 LOC106600502 other upstream 127006 1156034 ~ 1164637 (-)
LOC110508327 lig1 other upstream 674785 1703128 ~ 1742400 (-)
G2094433 LOC106600477 other upstream 877879 1906907 ~ 1907412 (-)
G2096163 NA other upstream 2280116 3309144 ~ 3309674 (-)

Expression

phc3(phc3) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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phc3(phc3) Expression in each Bioproject

Bar chart with 19 bars.
phc3(phc3) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network