LOC110508321 (LOC106600497)


Basic Information

Item Value
gene id LOC110508321
gene name LOC106600497
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 1402727 ~ 1414817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966507.1
AACACAAATCTTGTCACAAATCTACGGCTTGGTTCAAGAGAAGAGCCTGAGCTATCAATGATAGTTTtgtgtattttatattttaaagAAGGTATAGGCTATCTATTTCTAGTTGACAATCTTACTGTAGTTTCTTCCAATACACCATCCAAGTTGGATTGCAATGACTGGGTTGCATGAGCATGCGTATGATAACAATGCAGACAAGTGCACTAGACAAATGTCAAGGAGTCTTACGGTTTAGTACTGGAAGAACTTTGCCTTCTTCTGACGCACTTTTCAATTAGTTTTTAAACGCGGCTTGCAAGACACATCAAGTCAAGATGACATCTGCCACGCCCCCTTCCTCCCGAAGCTGCTCCCCTCAAAAGGTGTGTCACTCGCAGACGCAGACAGACGTTCTAAAGCCCCTATTGGGCGCCGGGAGCCCCGGCGGGGGCGGGACCTTGAGGAGgcggagacgtgttctgtctaaGGATGGGCGGAGTAACGTACGCATCGAACACATCAGCGGGCGGTCGGCCTTGTACATGCGTGACCTCTGGACGACGTTCCTGGATATGCAGTGGCGGTGGaagttctttctcttcacccttaCCTTCACGGGGACGTGGTTCCTGTTCGGGGTTCTGTGGTACCTGGTGGCATTAGTGCATGGAGATCTGCTGgAGTTCAACCCACCGTCGAACCACACCCCGTGTGTGCTGCAGATGCAGACGCTGACTGGTGCATTCTTGTTCTCGCTGGAGTCCCAGACCACCATTGGCTACGGCTTCCGTTGCATCACAGAGGAATGTCCAGCTGCCATCATCCTCCTGATCCTGCAACTCGTCATCACCATGGTGCTGGAGATCTTCATCACCGGAACCTTCCTCGCCAAGGTGGCTCGGCCAAAGAAGCGAGGTGAGACGGTGAAGTTTAGCCAGCACGCCGTGGTGTCCAGTCACGAAGGCCGACCCTGCCTCATGATCCGAGTGGCCAACATGCGGAAGAGCCTGCTGCTGGGGTGCCAGGTGACGGGGAAGCTGCTGCAGACATCTCATACTAAGGAGGGGGAGACGGTGCGTCTGGACCAGAGGAACGTTCCCTTCCAGGTGGACACGTCCAGCGACAGCCCcttcctcatcctccccctcacATTTTACCACATCATAGACGACAACAGCCCGCTCAGGGCCTGGGCCGCCAAGGgcGGGGGATGGACAGATCCTGAGCTGGCGGACTTTGAGCTGCTGGTTATCATGAGTGCCACGGTAGAGCCCACCTCAGCCACCTGCCAGGTGCGTACCTCCTACCTGCCTGACGAGATCCTGTGGGGGTATGAGTTCCCCCCTGtggtctccctctccccctcagggAAGTACGTGGCCGACTTTGCCTTCTTCGACAAAGTGGCCAAAACCAAGACCACGCCCCTCTTCAAAACATCCCGCCCACAGAGCTACCATGgcaacggaggaggaggaggagggggggtggaggggacTGACCCGGAGAAGATCCGATTGGAGcagagctacagggagagaggagaggaagggagagggagggtcagAGACAGTAGCCCTCTCAGTGTCCGCATCAGCAATGTCTGAGAGCCTACACACTGAGACGCatacaccagacctgggttcaaatactattggaaatcatttcaaatacttttgtCCGTGCGTGATTGAGCTTTGCCTGGCTTAATGGATCCAATAGAATAGTCCGGAAACCGCtaaccctgcccatctggcactTCAGTAAGACTAAAGCAAACTCAAACTATTTGAAAGATGTAAATAGTATATGAACCTATGTATAGCATACACTGGATTCTAAGCAGGGTCTGTTACAGTTTACTACAAATATTGAAATGATAAATTCATTGCTTGTTGTTTATTTACATTAAATTGGTACATATAGAAATATTGAGGGGCAAAGTGTGTTATGGCTGGAGAGGGGGAAGTCCCTAGAAAGGCTTTGAATGCTTAGCGTGgatcgcaaatggcaccctactccctttatatcccctacgggccctggtcaaaagtagtgcactacatagggaatagggtgccatttgggattcagactTTGTACTGATGCTTCTCTGCCAACGTACTGGACACCCGTCCATAAATACACTGTAAAAACATACAAATATGTAACATTTTAGAATGTCTTGTGattttgttatttgttattgGTACGTGCCAATGTACTGTAGAATATGCTAGCTTAAAGCACTTTGGTGAAATGATAACACAAATGTATCAATACAAAAAAGAATGTAGACCTGTTGTGGACTTTGACTGGATATGAAGAAGACGAGAGAAGATGATTTTAAGGTGCTGTGTATAGTCGTCAGTATGCCTTTTCTGCACAGATATATCTGTTATTGTTGATACAGAGGACTGCAGTTAGCACTTTATTAAGTACCTTTGCACCTTAGGAGCGTTTGTAGCACTTAATATTACTGGAATGTATATAGATTTGTGCTTGTAACCCAACTAAAAGCACTTTAACACTGGATGAAATGTTTGAATGATGCTTTCTATTCATATTTTATGATTGGGATTTGAACAATTACGATTTTGTCCATTTTCCTCTCTTCAGTCAGTTTACCATGCGTTGTTTCTGTGGCATATTGatagaaaataatatttttgtaaataatcACAAACAGCCATTTAGAAGGTTCACCGCTAATAGCAGGATACGTTCTGGGCCTATTCTAGACACCAGATTGCCTTTACATAGAGTCTAAAAACACTccattccctatagtgcactacttttcaccttTGATTaaggcccacagggctctggtcaaaagtagtgcactatatatggaatagggtgccatttgggatgcacacccaGGGACTCACATGAGTACAGGCTTCTATTTCTTCCTCTGGTGGTAACCATGGCTTCATGTGTAAAGTAGGCTTCGGGGAAATTTGGGCGGGGTAACTTAAGTTGAGAGAGGTGTGTCAAGACCTAATCATGGCTTTAGATTAGAACATTAACCCTTGCCTTAATTTGGTTTACAGGAGAGAATGTACACGGACTGTTGGTATTGCTGAGGTGTTTTGAGAGGAAGCAAAAGTGATTATTGTGATTATGGTGTCCATGATTAGACTTGGGTTCAAATGCAATTGgccttgattgagcttgcctggcacaaaGGAACCAATCGAATAGTCACAAAACTGCAAACTCCACCCAGACTCTGGCAGTCTAGACAGACTGAAGCAAATGCTAAGGGAAAGGTTTCCCAGACAAAGATGAATCCTAGTCTGAgactaaaaaaacatttttaatggagagattctccattgaaagtgcttCTTAGTCCATGacaaggcttaatctgtgtcatGGAAACTGGTCAGAAAAGTAAATATTTGAAGCCAGGTCTGATCAATCATGATTTTGCCATTGTGATCTCTCAGAGGCCTTGAAGCCTGAGTGCTTTGTTGATATGAACTATTAACTGTGGGAGAGGTTTGATATTTTGTCTTCAACTTGTCTAGGTTTTTCACTGGAAAACTTGAATGTTGTCTTCTAGATCTTTAACAGCATAAGCTAATTTGAAATAAAGAATTATCAAAGTA
>XM_036966506.1
aagagggtgagagagggagcaggagagggaaaggaaaaggagagggagatcaGGAAAACATGCAAAACGCCTTTGTAGTTTAGAGGGAGAAGTTTTGATTCAGTTGATCATTCTGATATTAGAGTAATAATACCGTTGTACAAAAGTAGATGTGTTGTCATGGAGATGGAATACATCCTATTGGAAAGATGACATCTGCCACGCCCCCTTCCTCCCGAAGCTGCTCCCCTCAAAAGGTGTGTCACTCGCAGACGCAGACAGACGTTCTAAAGCCCCTATTGGGCGCCGGGAGCCCCGGCGGGGGCGGGACCTTGAGGAGgcggagacgtgttctgtctaaGGATGGGCGGAGTAACGTACGCATCGAACACATCAGCGGGCGGTCGGCCTTGTACATGCGTGACCTCTGGACGACGTTCCTGGATATGCAGTGGCGGTGGaagttctttctcttcacccttaCCTTCACGGGGACGTGGTTCCTGTTCGGGGTTCTGTGGTACCTGGTGGCATTAGTGCATGGAGATCTGCTGgAGTTCAACCCACCGTCGAACCACACCCCGTGTGTGCTGCAGATGCAGACGCTGACTGGTGCATTCTTGTTCTCGCTGGAGTCCCAGACCACCATTGGCTACGGCTTCCGTTGCATCACAGAGGAATGTCCAGCTGCCATCATCCTCCTGATCCTGCAACTCGTCATCACCATGGTGCTGGAGATCTTCATCACCGGAACCTTCCTCGCCAAGGTGGCTCGGCCAAAGAAGCGAGGTGAGACGGTGAAGTTTAGCCAGCACGCCGTGGTGTCCAGTCACGAAGGCCGACCCTGCCTCATGATCCGAGTGGCCAACATGCGGAAGAGCCTGCTGCTGGGGTGCCAGGTGACGGGGAAGCTGCTGCAGACATCTCATACTAAGGAGGGGGAGACGGTGCGTCTGGACCAGAGGAACGTTCCCTTCCAGGTGGACACGTCCAGCGACAGCCCcttcctcatcctccccctcacATTTTACCACATCATAGACGACAACAGCCCGCTCAGGGCCTGGGCCGCCAAGGgcGGGGGATGGACAGATCCTGAGCTGGCGGACTTTGAGCTGCTGGTTATCATGAGTGCCACGGTAGAGCCCACCTCAGCCACCTGCCAGGTGCGTACCTCCTACCTGCCTGACGAGATCCTGTGGGGGTATGAGTTCCCCCCTGtggtctccctctccccctcagggAAGTACGTGGCCGACTTTGCCTTCTTCGACAAAGTGGCCAAAACCAAGACCACGCCCCTCTTCAAAACATCCCGCCCACAGAGCTACCATGgcaacggaggaggaggaggagggggggtggaggggacTGACCCGGAGAAGATCCGATTGGAGcagagctacagggagagaggagaggaagggagagggagggtcagAGACAGTAGCCCTCTCAGTGTCCGCATCAGCAATGTCTGAGAGCCTACACACTGAGACGCatacaccagacctgggttcaaatactattggaaatcatttcaaatacttttgtCCGTGCGTGATTGAGCTTTGCCTGGCTTAATGGATCCAATAGAATAGTCCGGAAACCGCtaaccctgcccatctggcactTCAGTAAGACTAAAGCAAACTCAAACTATTTGAAAGATGTAAATAGTATATGAACCTATGTATAGCATACACTGGATTCTAAGCAGGGTCTGTTACAGTTTACTACAAATATTGAAATGATAAATTCATTGCTTGTTGTTTATTTACATTAAATTGGTACATATAGAAATATTGAGGGGCAAAGTGTGTTATGGCTGGAGAGGGGGAAGTCCCTAGAAAGGCTTTGAATGCTTAGCGTGgatcgcaaatggcaccctactccctttatatcccctacgggccctggtcaaaagtagtgcactacatagggaatagggtgccatttgggattcagactTTGTACTGATGCTTCTCTGCCAACGTACTGGACACCCGTCCATAAATACACTGTAAAAACATACAAATATGTAACATTTTAGAATGTCTTGTGattttgttatttgttattgGTACGTGCCAATGTACTGTAGAATATGCTAGCTTAAAGCACTTTGGTGAAATGATAACACAAATGTATCAATACAAAAAAGAATGTAGACCTGTTGTGGACTTTGACTGGATATGAAGAAGACGAGAGAAGATGATTTTAAGGTGCTGTGTATAGTCGTCAGTATGCCTTTTCTGCACAGATATATCTGTTATTGTTGATACAGAGGACTGCAGTTAGCACTTTATTAAGTACCTTTGCACCTTAGGAGCGTTTGTAGCACTTAATATTACTGGAATGTATATAGATTTGTGCTTGTAACCCAACTAAAAGCACTTTAACACTGGATGAAATGTTTGAATGATGCTTTCTATTCATATTTTATGATTGGGATTTGAACAATTACGATTTTGTCCATTTTCCTCTCTTCAGTCAGTTTACCATGCGTTGTTTCTGTGGCATATTGatagaaaataatatttttgtaaataatcACAAACAGCCATTTAGAAGGTTCACCGCTAATAGCAGGATACGTTCTGGGCCTATTCTAGACACCAGATTGCCTTTACATAGAGTCTAAAAACACTccattccctatagtgcactacttttcaccttTGATTaaggcccacagggctctggtcaaaagtagtgcactatatatggaatagggtgccatttgggatgcacacccaGGGACTCACATGAGTACAGGCTTCTATTTCTTCCTCTGGTGGTAACCATGGCTTCATGTGTAAAGTAGGCTTCGGGGAAATTTGGGCGGGGTAACTTAAGTTGAGAGAGGTGTGTCAAGACCTAATCATGGCTTTAGATTAGAACATTAACCCTTGCCTTAATTTGGTTTACAGGAGAGAATGTACACGGACTGTTGGTATTGCTGAGGTGTTTTGAGAGGAAGCAAAAGTGATTATTGTGATTATGGTGTCCATGATTAGACTTGGGTTCAAATGCAATTGgccttgattgagcttgcctggcacaaaGGAACCAATCGAATAGTCACAAAACTGCAAACTCCACCCAGACTCTGGCAGTCTAGACAGACTGAAGCAAATGCTAAGGGAAAGGTTTCCCAGACAAAGATGAATCCTAGTCTGAgactaaaaaaacatttttaatggagagattctccattgaaagtgcttCTTAGTCCATGacaaggcttaatctgtgtcatGGAAACTGGTCAGAAAAGTAAATATTTGAAGCCAGGTCTGATCAATCATGATTTTGCCATTGTGATCTCTCAGAGGCCTTGAAGCCTGAGTGCTTTGTTGATATGAACTATTAACTGTGGGAGAGGTTTGATATTTTGTCTTCAACTTGTCTAGGTTTTTCACTGGAAAACTTGAATGTTGTCTTCTAGATCTTTAACAGCATAAGCTAATTTGAAATAAAGAATTATCAAAGTA
>XM_036966508.1
gagcaggagagggaaaggaaaaggagagggagatcaGGAAAACATGCAAAACGCCTTTGTAGTTTAGAGGGAGAAGTTTTGATTCAGTTGATCATTCTGATATTAGAGTAATAATACCGTTGTACAAAAGTAGATGTGTTGTCATGGAGATGGAATACATCCTATTGGAAAGCTGCTCCCCTCAAAAGGTGTGTCACTCGCAGACGCAGACAGACGTTCTAAAGCCCCTATTGGGCGCCGGGAGCCCCGGCGGGGGCGGGACCTTGAGGAGgcggagacgtgttctgtctaaGGATGGGCGGAGTAACGTACGCATCGAACACATCAGCGGGCGGTCGGCCTTGTACATGCGTGACCTCTGGACGACGTTCCTGGATATGCAGTGGCGGTGGaagttctttctcttcacccttaCCTTCACGGGGACGTGGTTCCTGTTCGGGGTTCTGTGGTACCTGGTGGCATTAGTGCATGGAGATCTGCTGgAGTTCAACCCACCGTCGAACCACACCCCGTGTGTGCTGCAGATGCAGACGCTGACTGGTGCATTCTTGTTCTCGCTGGAGTCCCAGACCACCATTGGCTACGGCTTCCGTTGCATCACAGAGGAATGTCCAGCTGCCATCATCCTCCTGATCCTGCAACTCGTCATCACCATGGTGCTGGAGATCTTCATCACCGGAACCTTCCTCGCCAAGGTGGCTCGGCCAAAGAAGCGAGGTGAGACGGTGAAGTTTAGCCAGCACGCCGTGGTGTCCAGTCACGAAGGCCGACCCTGCCTCATGATCCGAGTGGCCAACATGCGGAAGAGCCTGCTGCTGGGGTGCCAGGTGACGGGGAAGCTGCTGCAGACATCTCATACTAAGGAGGGGGAGACGGTGCGTCTGGACCAGAGGAACGTTCCCTTCCAGGTGGACACGTCCAGCGACAGCCCcttcctcatcctccccctcacATTTTACCACATCATAGACGACAACAGCCCGCTCAGGGCCTGGGCCGCCAAGGgcGGGGGATGGACAGATCCTGAGCTGGCGGACTTTGAGCTGCTGGTTATCATGAGTGCCACGGTAGAGCCCACCTCAGCCACCTGCCAGGTGCGTACCTCCTACCTGCCTGACGAGATCCTGTGGGGGTATGAGTTCCCCCCTGtggtctccctctccccctcagggAAGTACGTGGCCGACTTTGCCTTCTTCGACAAAGTGGCCAAAACCAAGACCACGCCCCTCTTCAAAACATCCCGCCCACAGAGCTACCATGgcaacggaggaggaggaggagggggggtggaggggacTGACCCGGAGAAGATCCGATTGGAGcagagctacagggagagaggagaggaagggagagggagggtcagAGACAGTAGCCCTCTCAGTGTCCGCATCAGCAATGTCTGAGAGCCTACACACTGAGACGCatacaccagacctgggttcaaatactattggaaatcatttcaaatacttttgtCCGTGCGTGATTGAGCTTTGCCTGGCTTAATGGATCCAATAGAATAGTCCGGAAACCGCtaaccctgcccatctggcactTCAGTAAGACTAAAGCAAACTCAAACTATTTGAAAGATGTAAATAGTATATGAACCTATGTATAGCATACACTGGATTCTAAGCAGGGTCTGTTACAGTTTACTACAAATATTGAAATGATAAATTCATTGCTTGTTGTTTATTTACATTAAATTGGTACATATAGAAATATTGAGGGGCAAAGTGTGTTATGGCTGGAGAGGGGGAAGTCCCTAGAAAGGCTTTGAATGCTTAGCGTGgatcgcaaatggcaccctactccctttatatcccctacgggccctggtcaaaagtagtgcactacatagggaatagggtgccatttgggattcagactTTGTACTGATGCTTCTCTGCCAACGTACTGGACACCCGTCCATAAATACACTGTAAAAACATACAAATATGTAACATTTTAGAATGTCTTGTGattttgttatttgttattgGTACGTGCCAATGTACTGTAGAATATGCTAGCTTAAAGCACTTTGGTGAAATGATAACACAAATGTATCAATACAAAAAAGAATGTAGACCTGTTGTGGACTTTGACTGGATATGAAGAAGACGAGAGAAGATGATTTTAAGGTGCTGTGTATAGTCGTCAGTATGCCTTTTCTGCACAGATATATCTGTTATTGTTGATACAGAGGACTGCAGTTAGCACTTTATTAAGTACCTTTGCACCTTAGGAGCGTTTGTAGCACTTAATATTACTGGAATGTATATAGATTTGTGCTTGTAACCCAACTAAAAGCACTTTAACACTGGATGAAATGTTTGAATGATGCTTTCTATTCATATTTTATGATTGGGATTTGAACAATTACGATTTTGTCCATTTTCCTCTCTTCAGTCAGTTTACCATGCGTTGTTTCTGTGGCATATTGatagaaaataatatttttgtaaataatcACAAACAGCCATTTAGAAGGTTCACCGCTAATAGCAGGATACGTTCTGGGCCTATTCTAGACACCAGATTGCCTTTACATAGAGTCTAAAAACACTccattccctatagtgcactacttttcaccttTGATTaaggcccacagggctctggtcaaaagtagtgcactatatatggaatagggtgccatttgggatgcacacccaGGGACTCACATGAGTACAGGCTTCTATTTCTTCCTCTGGTGGTAACCATGGCTTCATGTGTAAAGTAGGCTTCGGGGAAATTTGGGCGGGGTAACTTAAGTTGAGAGAGGTGTGTCAAGACCTAATCATGGCTTTAGATTAGAACATTAACCCTTGCCTTAATTTGGTTTACAGGAGAGAATGTACACGGACTGTTGGTATTGCTGAGGTGTTTTGAGAGGAAGCAAAAGTGATTATTGTGATTATGGTGTCCATGATTAGACTTGGGTTCAAATGCAATTGgccttgattgagcttgcctggcacaaaGGAACCAATCGAATAGTCACAAAACTGCAAACTCCACCCAGACTCTGGCAGTCTAGACAGACTGAAGCAAATGCTAAGGGAAAGGTTTCCCAGACAAAGATGAATCCTAGTCTGAgactaaaaaaacatttttaatggagagattctccattgaaagtgcttCTTAGTCCATGacaaggcttaatctgtgtcatGGAAACTGGTCAGAAAAGTAAATATTTGAAGCCAGGTCTGATCAATCATGATTTTGCCATTGTGATCTCTCAGAGGCCTTGAAGCCTGAGTGCTTTGTTGATATGAACTATTAACTGTGGGAGAGGTTTGATATTTTGTCTTCAACTTGTCTAGGTTTTTCACTGGAAAACTTGAATGTTGTCTTCTAGATCTTTAACAGCATAAGCTAATTTGAAATAAAGAATTATCAAAGTA

Function

NR:

description
ATP-sensitive inward rectifier potassium channel 10-like

GO: NA

KEGG:

id description
K05003 KCNJ10, KIR4.1; potassium inwardly-rectifying channel subfamily J member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966507.1 False 3611 mRNA 0.46 6 1402727 1414817
XM_036966506.1 False 3476 mRNA 0.47 6 1405445 1414817
XM_036966508.1 True 3428 mRNA 0.46 6 1405461 1414817

Neighbor

gene id symbol gene type direction distance location
LOC110509189 LOC106600499 coding upstream 85195 1243968 ~ 1317532 (+)
LOC110509188 LOC106600502 coding upstream 241802 1125824 ~ 1160925 (+)
prkci LOC106600503 coding upstream 295129 1036522 ~ 1107598 (+)
LOC110508316 LOC106600506 coding upstream 398436 996942 ~ 1004291 (+)
LOC110508203 LOC106600526 coding upstream 416135 984456 ~ 986592 (+)
LOC110508331 LOC106600487 coding downstream 376902 1791719 ~ 1798195 (+)
LOC110508332 LOC106600484 coding downstream 388977 1803794 ~ 1836904 (+)
LOC110508334 LOC106600477 coding downstream 433698 1848515 ~ 1918387 (+)
LOC110509192 LOC106600604 coding downstream 679259 2094076 ~ 2190557 (+)
LOC110508337 scg2 coding downstream 1044815 2459632 ~ 2464135 (+)
G2093838 NA non-coding upstream 38122 1364123 ~ 1364605 (+)
G2093830 NA non-coding upstream 41938 1360549 ~ 1360789 (+)
G2093826 NA non-coding upstream 43857 1358582 ~ 1358870 (+)
G2093646 NA non-coding upstream 170695 1231778 ~ 1232032 (+)
G2093645 NA non-coding upstream 171047 1231393 ~ 1231680 (+)
G2093880 NA non-coding downstream 12954 1427771 ~ 1487137 (+)
G2093938 NA non-coding downstream 110429 1525246 ~ 1525596 (+)
G2093947 NA non-coding downstream 120220 1535037 ~ 1535254 (+)
G2094023 LOC106600492 non-coding downstream 233238 1648055 ~ 1649497 (+)
G2094029 NA non-coding downstream 242484 1657301 ~ 1659752 (+)
G2092558 NA other upstream 708069 694133 ~ 694658 (+)
G2093889 NA other downstream 29816 1444633 ~ 1446121 (+)
G2093960 mpz other downstream 269289 1684106 ~ 1696486 (+)
G2094884 NA other downstream 1239046 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 1486033 2900784 ~ 2969598 (+)

Expression


Co-expression Network