Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508354 |
| gene name | LOC106600577 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 3400259 ~ 3416450 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine protease 56-like |
| id | description |
|---|---|
| K23440 | PRSS56; serine protease 56 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021588810.2 | True | 6901 | mRNA | 0.49 | 14 | 3400259 | 3416450 |
3,396,000
3,398,000
3,400,000
3,402,000
3,404,000
3,406,000
3,408,000
3,410,000
3,412,000
3,414,000
3,416,000
3,418,000
3,420,000
3,422,000
3,424,000
3,426,000
3,428,000
3,430,000
3,432,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508353 | LOC106600578 | coding | upstream | 4208 | 3391439 ~ 3396051 (+) |
| alg3 | alg3 | coding | upstream | 65245 | 3326414 ~ 3335014 (+) |
| yeats2 | yeats2 | coding | upstream | 430661 | 2900784 ~ 2969598 (+) |
| LOC110508347 | LOC106600588 | coding | upstream | 508155 | 2837162 ~ 2892104 (+) |
| LOC110509193 | LOC106600589 | coding | upstream | 589926 | 2734571 ~ 2810333 (+) |
| LOC110508355 | pls2 | coding | downstream | 16797 | 3433247 ~ 3437957 (+) |
| ccl20a.3 | LOC106600611 | coding | downstream | 84394 | 3500844 ~ 3501988 (+) |
| LOC110508359 | LOC106600572 | coding | downstream | 156701 | 3573151 ~ 3639849 (+) |
| wdr47a | LOC106600571 | coding | downstream | 225405 | 3641855 ~ 3665208 (+) |
| aknad1 | LOC106600569 | coding | downstream | 279754 | 3696204 ~ 3703767 (+) |
| G2095917 | NA | non-coding | upstream | 20470 | 3379150 ~ 3379789 (+) |
| G2095769 | NA | non-coding | upstream | 60094 | 3339394 ~ 3340165 (+) |
| G2095894 | LOC106600579 | non-coding | upstream | 61218 | 3338597 ~ 3339041 (+) |
| G2095768 | NA | non-coding | upstream | 91081 | 3308245 ~ 3309178 (+) |
| G2095877 | NA | non-coding | upstream | 111160 | 3288494 ~ 3289099 (+) |
| G2096345 | LOC106600570 | non-coding | downstream | 261049 | 3677499 ~ 3679505 (+) |
| G2096365 | NA | non-coding | downstream | 297875 | 3714325 ~ 3722938 (+) |
| G2096381 | NA | non-coding | downstream | 324192 | 3740642 ~ 3740859 (+) |
| G2096382 | NA | non-coding | downstream | 324840 | 3741290 ~ 3741511 (+) |
| G2096385 | LOC106600567 | non-coding | downstream | 327599 | 3744049 ~ 3744283 (+) |
| G2095895 | LOC106600579 | other | upstream | 58740 | 3341184 ~ 3341519 (+) |
| G2094884 | NA | other | upstream | 745168 | 2653863 ~ 2655091 (+) |
| LOC110509192 | LOC106600604 | other | upstream | 1216641 | 2094076 ~ 2190557 (+) |
| G2093960 | mpz | other | upstream | 1705790 | 1684106 ~ 1696486 (+) |
| G2096475 | NA | other | downstream | 470930 | 3887380 ~ 3907871 (+) |
| G2096472 | NA | other | downstream | 483136 | 3899586 ~ 3917985 (+) |
| G2097031 | NA | other | downstream | 1119626 | 4536076 ~ 4536894 (+) |
| slc17a9b | LOC106600547 | other | downstream | 1295022 | 4682499 ~ 4714289 (+) |
| G2098625 | NA | other | downstream | 2552111 | 5968561 ~ 5998314 (+) |
