Gene
RNA
| Item | Value |
|---|---|
| gene id | wdr47a |
| gene name | LOC106600571 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 3641855 ~ 3665208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| WD repeat-containing protein 47 |
| id | description |
|---|---|
| K24746 | WDR47; WD repeat-containing protein 47 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036966842.1 | False | 5416 | mRNA | 0.52 | 17 | 3641855 | 3665208 |
| XM_036966840.1 | False | 5331 | mRNA | 0.52 | 17 | 3641856 | 3665208 |
| XM_036966841.1 | False | 5191 | mRNA | 0.52 | 17 | 3642428 | 3665208 |
| XM_036966838.1 | True | 5230 | mRNA | 0.52 | 17 | 3643442 | 3665208 |
3,644,000
3,648,000
3,652,000
3,656,000
3,660,000
3,664,000
3,668,000
3,672,000
3,676,000
3,680,000
3,684,000
3,688,000
3,692,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508359 | LOC106600572 | coding | upstream | 2006 | 3573151 ~ 3639849 (+) |
| ccl20a.3 | LOC106600611 | coding | upstream | 139867 | 3500844 ~ 3501988 (+) |
| LOC110508355 | pls2 | coding | upstream | 203898 | 3433247 ~ 3437957 (+) |
| LOC110508354 | LOC106600577 | coding | upstream | 225405 | 3400259 ~ 3416450 (+) |
| LOC110508353 | LOC106600578 | coding | upstream | 245804 | 3391439 ~ 3396051 (+) |
| aknad1 | LOC106600569 | coding | downstream | 30996 | 3696204 ~ 3703767 (+) |
| LOC110508363 | LOC106600569 | coding | downstream | 36689 | 3701897 ~ 3708652 (+) |
| LOC110508366 | LOC106600565 | coding | downstream | 111088 | 3776296 ~ 3786634 (+) |
| LOC110508367 | LOC106600566 | coding | downstream | 124986 | 3790194 ~ 3791599 (+) |
| LOC100653486 | LOC106600564 | coding | downstream | 132334 | 3797542 ~ 3814890 (+) |
| G2095917 | NA | non-coding | upstream | 262066 | 3379150 ~ 3379789 (+) |
| G2095769 | NA | non-coding | upstream | 301690 | 3339394 ~ 3340165 (+) |
| G2095894 | LOC106600579 | non-coding | upstream | 302814 | 3338597 ~ 3339041 (+) |
| G2095768 | NA | non-coding | upstream | 332677 | 3308245 ~ 3309178 (+) |
| G2095877 | NA | non-coding | upstream | 352756 | 3288494 ~ 3289099 (+) |
| G2096345 | LOC106600570 | non-coding | downstream | 12291 | 3677499 ~ 3679505 (+) |
| G2096365 | NA | non-coding | downstream | 49117 | 3714325 ~ 3722938 (+) |
| G2096381 | NA | non-coding | downstream | 75434 | 3740642 ~ 3740859 (+) |
| G2096382 | NA | non-coding | downstream | 76082 | 3741290 ~ 3741511 (+) |
| G2096385 | LOC106600567 | non-coding | downstream | 78841 | 3744049 ~ 3744283 (+) |
| G2095895 | LOC106600579 | other | upstream | 300336 | 3341184 ~ 3341519 (+) |
| yeats2 | yeats2 | other | upstream | 734650 | 2900784 ~ 2969598 (+) |
| G2094884 | NA | other | upstream | 986764 | 2653863 ~ 2655091 (+) |
| LOC110509192 | LOC106600604 | other | upstream | 1458237 | 2094076 ~ 2190557 (+) |
| G2093960 | mpz | other | upstream | 1947386 | 1684106 ~ 1696486 (+) |
| G2096475 | NA | other | downstream | 222172 | 3887380 ~ 3907871 (+) |
| G2096472 | NA | other | downstream | 234378 | 3899586 ~ 3917985 (+) |
| G2097031 | NA | other | downstream | 870868 | 4536076 ~ 4536894 (+) |
| slc17a9b | LOC106600547 | other | downstream | 1046264 | 4682499 ~ 4714289 (+) |
| G2098625 | NA | other | downstream | 2303353 | 5968561 ~ 5998314 (+) |
