aknad1 (LOC106600569)


Basic Information

Item Value
gene id aknad1
gene name LOC106600569
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 3696204 ~ 3703767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967071.1
GGCAGACGGGAACCGGGAGACCAGAGTCAAGGCATTGGTGAAAAACTGGGCCAGAGAAAGGGCTCCTTTTAAGGAGGGGACCATTTTGAGGGAGGAGGTCAGCATTGGGGAAGTTGTTGAAGCCGTGGGCTAGCACAGCACCAGGATAGTTCTGAGTGACGAGCACATGGAAGGGGATCCCCAAGATCAAGAGGAGGATTCTGAAGCCCAGAGGAGAGCCTCTTCCCCTCAGTCCTCTGTGCTATGGGAGAAGTGTATCCGGCAGAGTATCTTTGTGGACCTGAGTGAGGATGAGAGTCTCCACTTCAGTGACCTGGAGGGCTCCTTCACGGTGCATCTCTCCCAGGCAGAGTCGGCTATCTCAGGGAACAGCATCCATCTCAGTGAGAACTTAGAGCTGTCAGTGTCTGACTCTGGGGAGTCCTCCACAGAGAGCAGTAGCTGTGTCAGTGGCCAGagtgagagagtggtggagggtAAGACCAAGAGCAGTGGGAAGTGGGTGTCTGCCCAGAGACCCAACACTGAGCAGGAGCAGACCATCTGGGAGTATGAGAACGCAGGAGACACCTCCGATGAAGAACAGGAGGACCTTCCACATGACGGGGACCTGGGAAGCCAGTACATTAAGCCCTCAACCAATGACAGTCACAAGTCTGAGGAGAATTGCAAAATAGCTGATGTTCTATCAAAAGACCAAGCTGGAGCATTGCATTCAAGACACAATGTTAGAGATCATTTTGATTTGCCAGCAATGGTTGGAGAGATCAATATCATACAAGGTCACATGCAAATTGAAGTCAACACTATGAACCATGTATCTATAACTCCACCCgagggagagggtaaaggagCTTTTTTTTACTCTACAAAACCAGAGGCTGTTCCCACATGCAGTAGTCCTGTCTGTAAAGTCCCACACCCAGACATCACCCAGCTGCTGCTCCGTCACTTTTCCCAGGATGAGCTGTTCTGCTCAGGCAGTCTGATCGAGGCAGAGACCCTGCCGGAGGTGTCCCTTCTGGAGAGCATGGACGAGACAGTGCTGAGCAGGGGCCCATTGCACAGGAGCACAGGGAGccccaataataataatagtggaGGAGCCCCACGACGCAGCAGCACAGGGGGACCCAGCAGCGAGAGTGAGAGGAGTCAGAGCCTACAGGAAGAAGATGAAGGGAAGAGTGTTCAAATGAGTCCAAGAAAAAACCTGGAGGAGAAAAATGGAAGTAGGACTGCCTCAGAGGGAAAGAACACACGGAGTGCTGAGTCTTACAGCAGTGACGTCAACTCTCCTCAATATAGTGGCATATCAACCAGTAAAAGGGAAGTCCCTGAACAGGACAATAATGGTAGCAATGGTTCAGACCTAACCAAAGAGGAAGATGAGaatgatgaagatgaggaggaagacCAAATCTGTAGAGGTCCCCTGGTCAGAACCAGGTCTTTCAGCGAATTAAAGTATGGACAGGGCCAAGTCCACTACCCACTCCCTGACTTCTCCAAGGTGGCTCCCAAAGTGAAAATCCCGAAGAGTACCAGTGTTCCGGTGAGACCTGTCAGTCAGTCTCCCAGCTTCCTCAGAGCTCAGTCCTCGCCAGGCATGCTGGGTAAGTCCTCTGCTTTGGAGGTGATCCACAGAGTGATGGAGGACTCTATTCAGCCCTCAGAGAGACCCTACGTGTTTCGAGACCAGGACAAGCAGACAGAAACCTCCCCAGGACTGGCGCGTCACCTACAGGCTGAATACGATAAACTAATGACTAAGTATGCAGAGGCTGAGAACCTCCTTGATCAGATGAGACTGGGGACAAAAGTGTTTAAAAGTATGATGGattcccaggaccagctggagaGGCGGTACATCAGTAAGAAGGAGGAGCACAGAACTCTGGAGATGCAGAACTACTTTGGCCTGGCCAGGAACACAGGCCAGTTTGACCCCGAAAGGCAGGTGGAGGGGGAGATATTCAGGATAGGGATGCATCTAGAGGACATTAAAGAGCTGATTGACAGGAACGTGCGTGAGCAGCAGCTCTCCCCACCCCACTCATCCTCCACACTCCTGTCACTGTGTGGTGGTCCCAGTCTCCCTGGTCTGCTCACCCCCTCACTTCCACCACCCATGCATGAGGGTCTCACATTACAGATTCCAGGCCCCTGTTTTTCCACTGGGGGTTATGAGAcagtggagagggaggaagatgaggaggatgaggaagaggccAGTGAGGTCCATAGACATGATGGTTTAGACCAGAGCTGTGATCTCACACCTGCTGACCCCCAACTGAACAGCACAGGACACAGCAGTGTCAGTCTACGGCTCTCACAGGGCTCCCTGGAGACAGTGGACATCACCAACacggaggaacaggaggaggaagaagaggagaggagctggaCCTGCTCGGGCCTATCTGAGCGGATAGCTCGTGATAGGGTTCTGCAGTATTTGGCTCTCCAGAACCCAGGATTTCGAGACAGACTTTGGACAACTGAAAGCCTGCAGCAGAGTCCCCTGAGCCCAGACTGTGACCTGGGAGGGAGTGTGAGTCTGGCTTTAGAGGTTTCCTGTTCCTCTTGTCTGAAGAGCCAGTCCCAGAGCATCACAGACCACACTCTCACCACTTCCCAGGCTCCAGCTCCAGCCTGA

Function

NR:

description
protein AKNAD1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967071.1 True 2662 mRNA 0.53 9 3696204 3703767

Neighbor

gene id symbol gene type direction distance location
wdr47a LOC106600571 coding upstream 30996 3641855 ~ 3665208 (+)
LOC110508359 LOC106600572 coding upstream 56355 3573151 ~ 3639849 (+)
ccl20a.3 LOC106600611 coding upstream 194216 3500844 ~ 3501988 (+)
LOC110508355 pls2 coding upstream 258247 3433247 ~ 3437957 (+)
LOC110508354 LOC106600577 coding upstream 279754 3400259 ~ 3416450 (+)
LOC110508366 LOC106600565 coding downstream 72529 3776296 ~ 3786634 (+)
LOC110508367 LOC106600566 coding downstream 86427 3790194 ~ 3791599 (+)
LOC100653486 LOC106600564 coding downstream 93775 3797542 ~ 3814890 (+)
LOC118944845 NA coding downstream 266585 3970352 ~ 3972045 (+)
LOC110508370 LOC106600557 coding downstream 556940 4260707 ~ 4280126 (+)
G2096345 LOC106600570 non-coding upstream 16699 3677499 ~ 3679505 (+)
G2095917 NA non-coding upstream 316415 3379150 ~ 3379789 (+)
G2095769 NA non-coding upstream 356039 3339394 ~ 3340165 (+)
G2095894 LOC106600579 non-coding upstream 357163 3338597 ~ 3339041 (+)
G2095768 NA non-coding upstream 387026 3308245 ~ 3309178 (+)
G2096365 NA non-coding downstream 10558 3714325 ~ 3722938 (+)
G2096381 NA non-coding downstream 36875 3740642 ~ 3740859 (+)
G2096382 NA non-coding downstream 37523 3741290 ~ 3741511 (+)
G2096385 LOC106600567 non-coding downstream 40282 3744049 ~ 3744283 (+)
G2096386 NA non-coding downstream 40958 3744725 ~ 3745472 (+)
G2095895 LOC106600579 other upstream 354685 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 788999 2900784 ~ 2969598 (+)
G2094884 NA other upstream 1041113 2653863 ~ 2655091 (+)
LOC110509192 LOC106600604 other upstream 1512586 2094076 ~ 2190557 (+)
G2093960 mpz other upstream 2001735 1684106 ~ 1696486 (+)
G2096475 NA other downstream 183613 3887380 ~ 3907871 (+)
G2096472 NA other downstream 195819 3899586 ~ 3917985 (+)
G2097031 NA other downstream 832309 4536076 ~ 4536894 (+)
slc17a9b LOC106600547 other downstream 1007705 4682499 ~ 4714289 (+)
G2098625 NA other downstream 2264794 5968561 ~ 5998314 (+)

Expression


Co-expression Network