trnas-uga-85


Basic Information

Item Value
gene id trnas-uga-85
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 4386727 ~ 4386808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnas-uga-85
GCTgcgatggccgagtggttaaggcatTGGACTTGAAATCAAATGGGGTCTCCCTgcgcaggttcgaaccctgctcacagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-uga-85 True 82 mRNA 0.57 1 4386727 4386808

Neighbor

gene id symbol gene type direction distance location
LOC110509198 LOC106600553 coding upstream 7838 4372797 ~ 4378889 (+)
LOC110508372 LOC106600555 coding upstream 43289 4339154 ~ 4343438 (+)
LOC110508371 LOC106600556 coding upstream 48339 4289317 ~ 4338388 (+)
LOC110508370 LOC106600557 coding upstream 106601 4260707 ~ 4280126 (+)
LOC118944845 NA coding upstream 414682 3970352 ~ 3972045 (+)
LOC110508375 LOC106600551 coding downstream 108245 4495053 ~ 4526091 (+)
LOC110509199 LOC106600550 coding downstream 157480 4544288 ~ 4547478 (+)
LOC110508377 gid8 coding downstream 289758 4676566 ~ 4679451 (+)
slc17a9b LOC106600547 coding downstream 295691 4682499 ~ 4714289 (+)
LOC110485777 LOC106612417 coding downstream 482417 4869225 ~ 4872490 (+)
G2096924 NA non-coding upstream 25982 4360505 ~ 4360745 (+)
G2096906 NA non-coding upstream 29750 4355891 ~ 4356977 (+)
G2096904 NA non-coding upstream 31416 4353146 ~ 4355311 (+)
G2096907 NA non-coding upstream 36933 4349516 ~ 4349794 (+)
G2096921 NA non-coding upstream 42162 4344262 ~ 4344565 (+)
G2096945 NA non-coding downstream 2517 4389325 ~ 4389595 (+)
G2096947 NA non-coding downstream 4857 4391665 ~ 4391870 (+)
G2096948 NA non-coding downstream 5105 4391913 ~ 4392403 (+)
G2096949 NA non-coding downstream 5958 4392766 ~ 4393020 (+)
G2096950 NA non-coding downstream 6951 4393759 ~ 4393999 (+)
G2096472 NA other upstream 468742 3899586 ~ 3917985 (+)
G2096475 NA other upstream 478856 3887380 ~ 3907871 (+)
G2095895 LOC106600579 other upstream 1045208 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 1479522 2900784 ~ 2969598 (+)
G2094884 NA other upstream 1731636 2653863 ~ 2655091 (+)
G2097031 NA other downstream 149268 4536076 ~ 4536894 (+)
G2098625 NA other downstream 1581753 5968561 ~ 5998314 (+)
G2098849 NA other downstream 1702920 6089728 ~ 6090062 (+)
LOC110509204 prpf6 other downstream 1736920 6123728 ~ 6157102 (+)

Expression


Co-expression Network