slc17a9b (LOC106600547)


Basic Information

Item Value
gene id slc17a9b
gene name LOC106600547
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 4682499 ~ 4714289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966448.1
GGAGGGTGGCGTGAACGGGCTTCCATAGTTATCATCCAGGTTATGTAGCATAGAGTTTCAAGAATATTGCACAGTCATTATGGAGCGCGAACGCCTATGTTGGATGGATGTACTAGGCAGCGATACCCCGGGTGGAAAAGAGAGTGCATTCAAACTGGTTTTCATAGGGACTGAGTAACTTCTTTAACTTACTTCCTGGTGTAACAAACCGTTAGCAGGAAGAACTGCGTGTCTGGAAAATAAAACGGACACGTGGATTATCATTGCTCCTCTAGTTCCAGGCAAGAGCCACGGAAAAAAAACATCCTCTTTGTGGCTATCTGTTCTTATTCTCCCGTGCTCTTCATCTCATCACACTGCAATACAataatggatcctcgttaaacgAAAGGAAATGATAAGTGGGCGCGAACATCGATCAAAGCGTTTCTTTTTGTCGGCTTTCCTCACTCATTCCATAGCCCACTGAACTGCGACGTGCAGGAAAAAGCAAATCTCAAACATTAGCATCTCTTGTTGAATGGCAATTCTGCAAAAACATGGAAAGATCTCTGGTCCAGATTTGGTCTGCCTCAAAGAAACCCCGTCAGACACAATCGGTGACGCCGGAGGTCATCAGAAGAATTGGAGTGAACATAACACGAACTGGCCCAGACCCCTGGCGCGGGTATGGACGGTGGTGCTACTGCTGGGGACCTGTCTGCTGTACTGTGCCCGCGTGGCCATGCCCATCTGTGCCGTCAGCATGGCCGAGAAGTTTAACTGGACCAAGAGGGAACAGGGCATGGTGCTGGGCAGCTTCTTCTGGGGCTACTGCTTCACACAGGTCCTTGGAGGCTACGTCAGCGACAGGGTTGGAGGTGAGAAGGTGCTCCTGCTGTCTGCGGCGGCCTGGGGGGCGATGACAGCCTTCACGCCCGTCCTGGCCCACTTCTGCTCTCAGCCCATCTTCTCCATGACGCTGGCCCGCTTCCTGATGGGGCTGCTGCAAGGTGTGCACTACCCGTCTCTGGTTAGCCTGTGTTCTCAGAAGGtggtggagagtgagagaggattcCTCATGAGCACTGTGGGCAGTGGCTCCTATCTGGGGACACTGGTGATTGGGGGGGCTGGTTCCCTCATGCTGGACCTGTATGGTTGGGAGAGTGTGTTCTACGTGTCTGGTCTGCTCTCTGTCCTCTGGGCGTACTGCATATGGAAATACCTGCTCAAAGGGGAAGgaccTATCATCACATTGGAGTCGCTGGGTCGTGGAGGGCCCCGGTCCAAACTCTCCAAGAGACACTGGCTACGTCTCTTCAAACAACCTGCTGTCTGtgctgtgatTATTACGCACCTTTGCACTGCGAGCACCTTCTTCACAATGTTGTCATGGCTACCGACTTACTTCAAGGACACCTTCCCTGATGCCAAGGGTTGGGTGTTTAATGTTATCCCATGGTTTGTGgccatcccctcttctctcttcagtgGCTGTCTCTCTGACCACCTTATCAGCCGAGggtTTGACACTGCTGCTGTGAGGAAGCTTATGCAGTTCTTCTCCATgggtgtgtccagtgtgtttaCCCTCCTGCTGTGTGGCACCACCACCTTCCCCACAGCTGTGGCCTTTGTCTCTGCCACCATGGGCCTCACCACCTTCAGCCACAGTGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTGTTATGAATACCTGTGGAGCATTCTCAGGTGTGCTGATGGTGTATTTCTCGGGGTATCTGATTGAGGCTACAGGGTCGTGGGCGTCTGTCTTCACCCTCATCACTGTGGTGAACCTGGTGGGCCTGGTCACCTTCCTGGCCTTTGCTGAGGCCCGCCGGGTCGACATGGACTCTTCCAAGGGCCACTACCACGACATCCACATCTGAGTCCCAACCCCTGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCGCATCTGAGTCCCAAGCCCAGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCACATCTGAGTCCCCAAAACAGGACCAGAACCTATGCCCATGTACCACAGAATGCACACGGGAGACTTAAATATAGAAAGAGAACAGCGAGAGCCTTGGTCTGTTGAATGTATCAAAACATCCACATCAGAATTTGAGAAGTGAAAGAAGTGAAACAGTAGTGAAAGTCAATCCTAGATGTTTGTCAGATCATAGTCAGTGCTTCTTCTATATTAATTTAACAACTCAATTGTTTCTCTCTATATAGACatttgtggatttggccatttcagctacacctgttgctgacaagcacacagccatgtcatctctatagacaaacattagcacagtagaatggccttactgaagagctcagtgactttcaacttggcaccgtcaTAAGATGTCACCAGTTTGTctaatgtctgccctgctagagcttccccggtcaaatgtcagtgctgttattgtgacgtggaaacgtctaggagcaacaacggtcgCAAAATGGtacgccacacaagctcacagaacgggactgtcGAGTACTGAAGCACGTagaaatcatctgtcctcagttacaattttcactaccgagttccaaacggcctctggaagcaacgtcagcacaagaactgtcgggagcttcatgagaagggtttccatggccgagcagccgcacacaa
>XM_036966445.1
GAGGGTGGCGTGAACGGGCTTCCATAGTTATCATCCAGGTTATGTAGCATAGAGTTTCAAGAATATTGCACAGTCATTATGGAGCGCGAACGCCTATGTTGGATGGATGTACTAGGCAGCGATACCCCGGGTGGAAAAGAGAGTGCATTCAAACTGGTTTTCATAGGGACTGAGTAACTTCTTTAACTTACTTCCTGGTGTAACAAACCGTTAGCAGGAAGAACTGCGTGTCTGGAAAATAAAACGGACACGTGGATTATCATTGCTCCTCTAGTTCCAGGCAAGAGCCACGGAAAAAAAACATCCTCTTTGTGGCTATCTGTTCTTATTCTCCCGTGCTCTTCATCTCATCACACTGCAATACAataatggatcctcgttaaacgAAAGGAAATGATAAGTGGGCGCGAACATCGATCAAAGCGTTTCTTTTTGTCGGCTTTCCTCACTCATTCCATAGCCCACTGAACTGCGACGTGCAGGAAAAAGCAAATCTCAAACATTAGCATCTCTTGTTGAATGGCAATTCTGCAAAAACATGGAAAGATCTCTGGTCCAGATTTGGTCTGCCTCAAAGAAACCCCGTCAGACACAATCGGTGACGCCGGAGGTCATCAGAAGAATTGGAGTGAACATAACACGAACTGGCCCAGACCCCTGGCGCGGGTATGGACGGTGGTGCTACTGCTGGGGACCTGTCTGCTGTACTGTGCCCGCGTGGCCATGCCCATCTGTGCCGTCAGCATGGCCGAGAAGTTTAACTGGACCAAGAGGGAACAGGGCATGGTGCTGGGCAGCTTCTTCTGGGGCTACTGCTTCACACAGGTCCTTGGAGGCTACGTCAGCGACAGGGTTGGAGGTGAGAAGGTGCTCCTGCTGTCTGCGGCGGCCTGGGGGGCGATGACAGCCTTCACGCCCGTCCTGGCCCACTTCTGCTCTCAGCCCATCTTCTCCATGACGCTGGCCCGCTTCCTGATGGGGCTGCTGCAAGGTGTGCACTACCCGTCTCTGGTTAGCCTGTGTTCTCAGAAGGtggtggagagtgagagaggattcCTCATGAGCACTGTGGGCAGTGGCTCCTATCTGGGGACACTGGTGATTGGGGGGGCTGGTTCCCTCATGCTGGACCTGTATGGTTGGGAGAGTGTGTTCTACGTGTCTGGTCTGCTCTCTGTCCTCTGGGCGTACTGCATATGGAAATACCTGCTCAAAGGGGAAGgaccTATCATCACATTGGAGTCGCTGGGTCGTGGAGGGCCCCGGTCCAAACTCTCCAAGAGACACTGGCTACGTCTCTTCAAACAACCTGCTGTCTGtgctgtgatTATTACGCACCTTTGCACTGCGAGCACCTTCTTCACAATGTTGTCATGGCTACCGACTTACTTCAAGGACACCTTCCCTGATGCCAAGGGTTGGGTGTTTAATGTTATCCCATGGTTTGTGgccatcccctcttctctcttcagtgGCTGTCTCTCTGACCACCTTATCAGCCGAGggtTTGACACTGCTGCTGTGAGGAAGCTTATGCAGTTCTTCTCCATgggtgtgtccagtgtgtttaCCCTCCTGCTGTGTGGCACCACCACCTTCCCCACAGCTGTGGCCTTTGTCTCTGCCACCATGGGCCTCACCACCTTCAGCCACAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTGTTATGAATACCTGTGGAGCATTCTCAGGTGTGCTGATGGTGTATTTCTCGGGGTATCTGATTGAGGCTACAGGGTCGTGGGCGTCTGTCTTCACCCTCATCACTGTGGTGAACCTGGTGGGCCTGGTCACCTTCCTGGCCTTTGCTGAGGCCCGCCGGGTCGACATGGACTCTTCCAAGGGCCACTACCACGACATCCACATCTGAGTCCCAACCCCTGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCGCATCTGAGTCCCAAGCCCAGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCACATCTGAGTCCCCAAAACAGGACCAGAACCTATGCCCATGTACCACAGAATGCACACGGGAGACTTAAATATAGAAAGAGAACAGCGAGAGCCTTGGTCTGTTGAATGTATCAAAACATCCACATCAGAATTTGAGAAGTGAAAGAAGTGAAACAGTAGTGAAAGTCAATCCTAGATGTTTGTCAGATCATAGTCAGTGCTTCTTCTATATTAATTTAACAACTCAATTGTTTCTCTCTATATAGACatttgtggatttggccatttcagctacacctgttgctgacaagcacacagccatgtcatctctatagacaaacattagcacagtagaatggccttactgaagagctcagtgactttcaacttggcaccgtcaTAAGATGTCACCAGTTTGTctaatgtctgccctgctagagcttccccggtcaaatgtcagtgctgttattgtgacgtggaaacgtctaggagcaacaacggtcgCAAAATGGtacgccacacaagctcacagaacgggactgtcGAGTACTGAAGCACGTagaaatcatctgtcctcagttacaattttcactaccgagttccaaacggcctctggaagcaacgtcagcacaagaactgtcgggagcttcatgagaagggtttccatggccgagcagccgcacacaa
>XM_036966446.1
TGGCGTGAACGGGCTTCCATAGTTATCATCCAGGTTATGTAGCATAGAGTTTCAAGAATATTGCACAGTCATTATGGAGCGCGAACGCCTATGTTGGATGGATGTACTAGGCAGCGATACCCCGGGTGGAAAAGAGAGTGCATTCAAACTGGTTTTCATAGGGACTGAGTAACTTCTTTAACTTACTTCCTGGTGTAACAAACCGTTAGCAGGAAGAACTGCGTGTCTGGAAAATAAAACGGACACGTGGATTATCATTGCTCCTCTAGTTCCAGGCAAGAGCCACGGAAAAAAAACATCCTCTTTGTGGCTATCTGTTCTTATTCTCCCGTGCTCTTCATCTCATCACACTGCAATACAataatggatcctcgttaaacgAAAGGAAATGATAAGTGGGCGCGAACATCGATCAAAGCGTTTCTTTTTGTCGGCTTTCCTCACTCATTCCATAGCCCACTGAACTGCGACGTGCAGGAAAAAGCAAATCTCAAACATTAGCATCTCTTGTTGAATGGCAATTCTGCAAAAACATGGAAAGATCTCTGGTCCAGATTTGGTCTGCCTCAAAGAAACCCCGTCAGACACAATCGGTGACGCCGGAGGTCATCAGAAGAATTGGAGTGAACATAACACGAACTGGCCCAGACCCCTGGCGCGGGTATGGACGGTGGTGCTACTGCTGGGGACCTGTCTGCTGTACTGTGCCCGCGTGGCCATGCCCATCTGTGCCGTCAGCATGGCCGAGAAGTTTAACTGGACCAAGAGGGAACAGGGCATGGTGCTGGGCAGCTTCTTCTGGGGCTACTGCTTCACACAGGTCCTTGGAGGCTACGTCAGCGACAGGGTTGGAGGTGAGAAGGTGCTCCTGCTGTCTGCGGCGGCCTGGGGGGCGATGACAGCCTTCACGCCCGTCCTGGCCCACTTCTGCTCTCAGCCCATCTTCTCCATGACGCTGGCCCGCTTCCTGATGGGGCTGCTGCAAGGTGTGCACTACCCGTCTCTGGTTAGCCTGTGTTCTCAGAAGGtggtggagagtgagagaggattcCTCATGAGCACTGTGGGCAGTGGCTCCTATCTGGGGACACTGGTGATTGGGGGGGCTGGTTCCCTCATGCTGGACCTGTATGGTTGGGAGAGTGTGTTCTACGTGTCTGGTCTGCTCTCTGTCCTCTGGGCGTACTGCATATGGAAATACCTGCTCAAAGGGGAAGgaccTATCATCACATTGGAGTCGCTGGGTCGTGGAGGGCCCCGGTCCAAACTCTCCAAGAGACACTGGCTACGTCTCTTCAAACAACCTGCTGTCTGtgctgtgatTATTACGCACCTTTGCACTGCGAGCACCTTCTTCACAATGTTGTCATGGCTACCGACTTACTTCAAGGACACCTTCCCTGATGCCAAGGGTTGGGTGTTTAATGTTATCCCATGGTTTGTGgccatcccctcttctctcttcagtgGCTGTCTCTCTGACCACCTTATCAGCCGAGggtTTGACACTGCTGCTGTGAGGAAGCTTATGCAGTTCTTCTCCATgggtgtgtccagtgtgtttaCCCTCCTGCTGTGTGGCACCACCACCTTCCCCACAGCTGTGGCCTTTGTCTCTGCCACCATGGGCCTCACCACCTTCAGCCACAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGAGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGTGTCTGTGAATGTTCAGGATCTGG
>TU2399068
TCTTGTGTCTGTACTCCAGCGGTGAGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGAGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGTGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGAGTCTGTGAATGTTCAAGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAGACAGTAACGTGTCTTGTGTCTGTACTCCAGCGGTGTGTCTGTGAATGTTCAGGACCTGGCTCCGTCATGTGCTGGGGCTCTGTTTGGTATGTTACACCAGCAACTCATTTATCCACCTCTCAGCAGATTTGATTGATGAATATTACAGTCCTGTCAAATATTACAAATTAATCATGTATCTATTTTTCATTGCAGGTGTTATGAATACCTGTGGAGCATTCTCAGGTGTGCTGATGGTGTATTTCTCGGGGTATCTGATTGAGGCTACAGGGTCGTGGGCGTCTGTCTTCACCCTCATCACTGTGGTGAACCTGGTGGGCCTGGTCACCTTCCTGGCCTTTGCTGAGGCCCGCCGGGTCGACATGGACTCTTCCAAGGGCCACTACCACGACATCCACATCTGAGTCCCAACCCCTGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCGCATCTGAGTCCCAAGCCCAGGTCCCTCAACAACCACCTTTTAAACTGAGGGGCCAAAACGGGACCAGGTCCCACACTATCCACATCTGAGTCCCCAAAACAGGACCAGAACCTATGCCCATGTACCACAGAATGCACACGGGAGACTTAAATATAGAAAGAGAACAGCGAGAGCCTTGGTCTGTTGAATGTATCAAAACATCCACATCAGAATTTGAGAAGTGAAAGAAGTGAAACAGTAGTGAAAGTCAATCCTAGATGTTTGTCAGATCATAGTCAGTGCTTCTTCTATATTAATTTAACAACTCAATTGTTTCTCTCTATATAGACatttgtggatttggccatttcagctacacctgttgctgacaagcacacagccatgtcatctctatagacaaacattagcacagtagaatggccttactgaagagctcagtgactttcaacttggcaccgtcaTAAGATGTCACCAGTTTGTctaatgtctgccctgctagagcttccccggtcaaatgtcagtgctgttattgtgacgtggaaacgtctaggagcaacaacggtcgCAAAATGGtacgccacacaagctcacagaacgggactgtcGAGTACTGAAGCACGTagaaatcatctgtcctcagttacaattttcactaccgagttccaaacggcctctggaagcaacgtcagcacaagaactgtcgggagcttcatgagaagggtttccatggccgagcagccgcacacaagcctaaggtcaccatgcacaatgccatgTGTCgggtggagtggtgtaaagcttcctgccattggactctggaacatgcgttctctggagtgatgaatcacacttcaccctctggcagtctgatggacgaatctgggttttgcggatgccaggagaacgctacctgccccaatgcatagtgccaaatggAAAGattgtggaggaggaataatgatctgtggctgtttttcatggttcaggcccctcagttccagtgaagggaaatcacaatgctacagcatacaatgacattctacatgattctgtccttccaactttgtggcaacagtttggggaaggtgctttcctgttttagcatgacaatgcctccgtgcaaaaagcgaggtccatacagaaatggtttgccgagattggtgtggaagaacttgactggcctgcacagagccctgacctcaaccccatcgaaaaaCTTTGATGAATTGGAACattgactgcgagccaggcctaatcgcccaacatcagtgcccgacctctctaatgctcttgtggctgaatggaagcaagttcctgcagcaatgttccaacatctagtggaaagccttcccataagagtgtaagctgttatagcagcgaaggggggactaactccatattaTTGCC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966448.1 False 2744 mRNA 0.51 13 4682499 4713630
XM_036966445.1 False 2743 mRNA 0.51 13 4682500 4713630
XM_036966446.1 False 2091 mRNA 0.52 11 4682505 4711107
TU2399068 True 2390 TUCP 0.49 2 4711472 4714289
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508377 gid8 coding upstream 3048 4676566 ~ 4679451 (+)
LOC110509199 LOC106600550 coding upstream 135021 4544288 ~ 4547478 (+)
LOC110508375 LOC106600551 coding upstream 156408 4495053 ~ 4526091 (+)
trnas-uga-85 NA coding upstream 295691 4386727 ~ 4386808 (+)
LOC110509198 LOC106600553 coding upstream 303610 4372797 ~ 4378889 (+)
LOC110485777 LOC106612417 coding downstream 155595 4869225 ~ 4872490 (+)
LOC110508382 LOC106600607 coding downstream 393022 5106652 ~ 5112806 (+)
LOC110508384 LOC106600544 coding downstream 557439 5271069 ~ 5377935 (+)
LOC110508385 LOC106600542 coding downstream 678767 5392397 ~ 5496496 (+)
LOC110509204 prpf6 coding downstream 1410144 6123728 ~ 6157102 (+)
G2097348 NA non-coding upstream 14150 4668067 ~ 4668349 (+)
G2097318 NA non-coding upstream 39792 4628193 ~ 4642707 (+)
G2097314 LOC106600548 non-coding upstream 57579 4623539 ~ 4624920 (+)
G2097073 NA non-coding upstream 66579 4615675 ~ 4615920 (+)
G2097072 NA non-coding upstream 66916 4615272 ~ 4615583 (+)
G2097331 NA non-coding downstream 852 4714482 ~ 4719459 (+)
G2097370 NA non-coding downstream 7885 4721515 ~ 4722567 (+)
G2097372 NA non-coding downstream 12131 4725761 ~ 4726063 (+)
G2097420 NA non-coding downstream 102380 4816010 ~ 4816276 (+)
G2097422 NA non-coding downstream 108444 4822074 ~ 4822486 (+)
G2097031 NA other upstream 145605 4536076 ~ 4536894 (+)
G2096472 NA other upstream 764514 3899586 ~ 3917985 (+)
G2096475 NA other upstream 774628 3887380 ~ 3907871 (+)
G2095895 LOC106600579 other upstream 1340980 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 1775294 2900784 ~ 2969598 (+)
G2098625 NA other downstream 1254931 5968561 ~ 5998314 (+)
G2098849 NA other downstream 1376098 6089728 ~ 6090062 (+)
LOC110508396 LOC106600623 other downstream 1623705 6285145 ~ 6341018 (+)
zfp313 zfp313 other downstream 1667370 6381000 ~ 6389696 (+)

Expression

slc17a9b(LOC106600547) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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slc17a9b(LOC106600547) Expression in each Bioproject

Bar chart with 21 bars.
slc17a9b(LOC106600547) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network