Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508206 |
| gene name | LOC106600546 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 5080665 ~ 5092413 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: YTH domain-containing family protein 1-like isoform X1 |
| id | description |
|---|---|
| K20102 | YTHDF; YTH domain-containing family protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110508206 | True | 1916 | mRNA | 0.57 | 5 | 5080665 | 5092413 |
5,078,000
5,080,000
5,082,000
5,084,000
5,086,000
5,088,000
5,090,000
5,092,000
5,094,000
5,096,000
5,098,000
5,100,000
5,102,000
5,104,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508381 | LOC106600608 | coding | downstream | 242479 | 4836463 ~ 4838186 (-) |
| LOC110508376 | LOC106600548 | coding | downstream | 437976 | 4623312 ~ 4642689 (-) |
| trnas-uga-107 | NA | coding | downstream | 483567 | 4597014 ~ 4597098 (-) |
| trnas-uga-106 | NA | coding | downstream | 484763 | 4595816 ~ 4595902 (-) |
| trnas-uga-105 | NA | coding | downstream | 488603 | 4591981 ~ 4592062 (-) |
| LOC110508383 | LOC106566591 | coding | upstream | 23334 | 5115747 ~ 5247705 (-) |
| zbtb46 | LOC106600540 | coding | upstream | 425926 | 5518339 ~ 5752210 (-) |
| LOC110508393 | LOC106600538 | coding | upstream | 773706 | 5866119 ~ 5952354 (-) |
| LOC110508394 | samd10 | coding | upstream | 876507 | 5968920 ~ 6071924 (-) |
| LOC110508207 | LOC106600653 | coding | upstream | 988549 | 6080962 ~ 6081721 (-) |
| G2097873 | NA | non-coding | downstream | 768 | 5079659 ~ 5079897 (-) |
| G2097869 | NA | non-coding | downstream | 5553 | 5074833 ~ 5075112 (-) |
| G2097868 | NA | non-coding | downstream | 7241 | 5071567 ~ 5073424 (-) |
| G2097833 | NA | non-coding | downstream | 24018 | 5053740 ~ 5056647 (-) |
| G2097832 | NA | non-coding | downstream | 28009 | 5051819 ~ 5052656 (-) |
| G2097877 | NA | non-coding | upstream | 6355 | 5098768 ~ 5098986 (-) |
| G2097882 | NA | non-coding | upstream | 11138 | 5103551 ~ 5103765 (-) |
| G2097884 | NA | non-coding | upstream | 13196 | 5105609 ~ 5105837 (-) |
| G2097991 | NA | non-coding | upstream | 96771 | 5189184 ~ 5190222 (-) |
| G2098035 | NA | non-coding | upstream | 157166 | 5249579 ~ 5249784 (-) |
| G2097165 | NA | other | downstream | 755688 | 4324474 ~ 4324977 (-) |
| G2096731 | NA | other | downstream | 1129644 | 3949337 ~ 3951021 (-) |
| G2096732 | NA | other | downstream | 1133040 | 3947275 ~ 3947625 (-) |
| G2096163 | NA | other | downstream | 1770991 | 3309144 ~ 3309674 (-) |
| G2094433 | LOC106600477 | other | downstream | 3173253 | 1906907 ~ 1907412 (-) |
| G2098765 | NA | other | upstream | 852726 | 5945139 ~ 5946875 (-) |
| G2098763 | NA | other | upstream | 854722 | 5947135 ~ 5949100 (-) |
| G2098766 | NA | other | upstream | 855325 | 5947738 ~ 5949613 (-) |
| G2098793 | NA | other | upstream | 903412 | 5995825 ~ 5999494 (-) |
