Item | Value |
---|---|
gene id | LOC110508153 |
gene name | LOC106600169 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048592.1 |
NCBI id | CM023246.2 |
chromosome length | 43716683 |
location | 9219477 ~ 9227997 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
ETS-related transcription factor Elf-1-like isoform X1 |
id | description |
---|---|
K09428 | ELF1_2_4; E74-like factor 1/2/4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036966958.1 | False | 3573 | mRNA | 0.49 | 8 | 9219477 | 9227997 |
XM_036966959.1 | False | 3608 | mRNA | 0.49 | 8 | 9220438 | 9227997 |
XM_036966960.1 | True | 2920 | mRNA | 0.48 | 6 | 9223268 | 9227997 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110508460 | LOC106600156 | coding | upstream | 10454 | 9180376 ~ 9209023 (+) |
LOC110508457 | LOC106600145 | coding | upstream | 163094 | 9008953 ~ 9056383 (+) |
si:ch211-122l24.6 | LOC106600129 | coding | upstream | 225627 | 8988888 ~ 8993850 (+) |
LOC100136057 | LOC100136057 | coding | upstream | 230933 | 8987349 ~ 8988544 (+) |
LOC110508453 | LOC106600445 | coding | upstream | 249065 | 8955256 ~ 8970412 (+) |
sugt1 | sugt1 | coding | downstream | 3689 | 9231686 ~ 9255165 (+) |
zgc:153935 | LOC106600186 | coding | downstream | 112232 | 9340229 ~ 9344057 (+) |
si:ch211-91p5.3 | LOC106600195 | coding | downstream | 120427 | 9348424 ~ 9369671 (+) |
LOC118944864 | LOC106605357 | coding | downstream | 167499 | 9395496 ~ 9412390 (+) |
LOC110508466 | LOC106600207 | coding | downstream | 188694 | 9416691 ~ 9423308 (+) |
G2102165 | NA | non-coding | upstream | 67199 | 9150240 ~ 9152278 (+) |
G2102181 | NA | non-coding | upstream | 69660 | 9149482 ~ 9149817 (+) |
G2101905 | NA | non-coding | upstream | 199350 | 9019657 ~ 9020127 (+) |
G2101884 | NA | non-coding | upstream | 235132 | 8984070 ~ 8984345 (+) |
G2102289 | NA | non-coding | downstream | 164347 | 9392344 ~ 9392894 (+) |
G2102300 | NA | non-coding | downstream | 219745 | 9447742 ~ 9448348 (+) |
G2102306 | NA | non-coding | downstream | 225394 | 9453391 ~ 9474717 (+) |
G2102387 | NA | non-coding | downstream | 351261 | 9579258 ~ 9581515 (+) |
G2101665 | NA | other | upstream | 587028 | 8627972 ~ 8632449 (+) |
G2100382 | LOC106600009 | other | upstream | 1654931 | 7539189 ~ 7564546 (+) |
G2100344 | LOC107579696 | other | upstream | 1791062 | 7427571 ~ 7428415 (+) |
LOC110508407 | LOC106599981 | other | upstream | 2372489 | 6834257 ~ 6891325 (+) |
LOC110508401 | LOC106600630 | other | upstream | 2591446 | 6523039 ~ 6628031 (+) |
G2102343 | NA | other | downstream | 268564 | 9496561 ~ 9501330 (+) |
G2102469 | NA | other | downstream | 517676 | 9745673 ~ 9746174 (+) |
G2102608 | NA | other | downstream | 753012 | 9981009 ~ 9982191 (+) |
cbln12 | cbln3 | other | downstream | 1006204 | 10228449 ~ 10237267 (+) |
G2103305 | NA | other | downstream | 1078834 | 10306831 ~ 10307973 (+) |