LOC110508155 (mc6zb)


Basic Information

Item Value
gene id LOC110508155
gene name mc6zb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 9454427 ~ 9465088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966386.1
CACTCTGGAAGTAGCTACTGTAAGCGCTATGGTTTTACACAATGTTACTCCTACAAGGAGAAAGGtcgttgttcatatttccataACACATTTGATTGGCTAGAATATTTCAGGCTTTTACATGGTGTCAAGATACAACGATGGGATTGGTCAACTGTGTCGCCCCAAACGTTACATGGTCCTTGTTTTCGCGCGAAAAGTGCACTTTCTCTTCTCCAGCGTGCATGGTACGGTTCGTCAAGGGAAGACGGAAGAGATTTTAGAAACTATTTTATATTTCAGTGTTAATCCAGTGAAAAGATGGATCTTGCACAGACGACTCAGGAGAATGCGGGACAGATGGTGAAAGACGAGTTAGCAGAGAAATGCCAGAAGCTTTTCCAGGCTTTCTTAGAAGAgtaccaGACATCAGACGGTGAGGTGAAGTATGTCCGTGATGCTGAGGAGCTGATCAGGCCTGAGAGAAACACTCTGTTGGTCTCCTTCACTGATCTGGAAGGATTTAACCAGGAACTGGCGACCACCATCCAGGAGGAGTTCTACAGAGTATATCCCTTCCTCTGTCGTGCGGTGAGGAGCTTTGCCAGGGATCACGGGAATGTCCCTGTCAATAAGGAGTTCTATTTGGCCGTCCAGGACCTGCCCACCAGACACAAGATCCGTGAGCTGTCCTCCTTGCGCATTGGTTCTCTGGTGCGCATCAGTGCACAGGTGGTGAGGACACACCCTGTACACCCAGAACTGGTGAGCGGGACGTTCCTTTGTCTGGACTGCCAGGGGGTGTGTCCGGACGTGCCCCAGCAGTTCAAGTATGCCCCGCCCACCGTCTGCAGGAACCCCGTCTGCAGCAACCGCGCTCGCTTCCACCTCGACACACACCGCTCCAAATTCATTGACTTCCAGAAGGTGCGTATCCAGGAGACCCAGGCAGAGCTGCCCAGAGGGTCCATCCCCCGCTCCCTAGAGGTGATTCTGAGGGCTGTACACGCACACGATAGACAGACACAATCACACCGCCATGACACGCACACAGTTCACCCTGACATGACccattttctccatctctctctaggtGTGCGAGCAGAGACGAGTTCCCGTGTAGGAGGGAGACAGGGTTATGAGAACGAGGGCCTTCGCGGTCTTAAAGCCCTGGGAGTCAGAGAGCTGTCCTACAGACTGGCCTTCCTCGCCTGCCATGTGGCTCCTACCAACCCCAGGttcggAGGGAAGGAGCTGCGTGATGAGGATCAGACGGCAGAGAGCATCAAGAGCCAGATGTCAGTTCAGGAGTGGGAGAAGGTGTTCGAGATGAGCCAAGACAAGAACCTCTACCACAACCTCGGCACCAGCCTCTTCCCCACCATACACGgtaatgACGAGGTGAAGCGTGGCATCCTGCTGATGTTGTTCGGGGGTGTTCCCAAAACCACCATGGAGGGAACATCTCTCAGAGGAGATGTGAACGTCTGCATCGTAGGAGACCCCTCGACCGCCAAGAGCCAGTTCCTCAAgCATGTGGAGGAGTTCAGTCCCAGGGCTGTGTATACCAGTGGGAAGGCCAGCAGTGCAGCCGTGGTTCGAGACGAGGAGTCACACGAGTTCGTCATCGAGGCCGGAGCTCTCATGCTCGCTGAcaacGGTGTGTGTTGTATCGATGAGTTTGACAAGATGGAGACCAGAGACCAAGTGGCCATCCATGAGGCCATGGAGCAACAGACCATCTCcatcactaaagctggagtcaaggccACTCTGAATGCCCGTACGTCCATCCTGGCGGCTGCTAACCCGGTCGGTGGTCGCTACGACCGCAGCAAGAGTCTGAAACAGAACGTCAACCTGTCCGCTCCCATCATGAGCCGCTTTGACCTCTTCTTCATCCTGGTGGACGACtgcaatgaggtgacagACTATGCCATAGCCAGGCGTATCGTGGATCTGCACTCTCGCATTGAGAACTCAGTAGACAGACTCTACTCTCTGGATGAGATCAGAAGATACCTGCTCTTCGCCCGACAGTTCAAACCCAAgATCTCTGGTGAGTCCGAGGAGTTCATCGTGGAGCAGTACAAACGGCTGCGTCAGCGCGACGGCTCTGGGGGCGTGGCCAAGTCGGCCTGGCGAATCACGGTGCGGCAGCTGGAGAGCATGATCCGCCTCTCTGAGGGCATGGCTCGCATGCACTGCTGCGACGAGGTCCAGCCTAAGCACGTGAAGGAGGCATTCCGCCTGCTGAATAAGTCCATCGTCAGAGTGGAGACGCCTGACGTCAATCTGGACCAGGaccaggagatggaggaggaggagggcgagaACGGCCGTGACGTTCCCAACGGAGTGAATGGCGTAAACGGCCTGGTTAACGAGCACGCTGATAGAATGAACGGCCACTCCGACGGAACTAACCGCGGCGCCAACGGAGTCGAAGGACTCACCGACGTTGTGAGCGGCCACTCCGACGGAACTAACCGCGGCGCCAACGGAGTCGAAGGACTCACCGACGTTGTGAGCGGCCACTCTGACAGCGGCCCCAAGCCGCCGCTGCGTCTGACATTCCCAGAGTACCGCCGCATCTCCAACCTGCTGGTGCTGCATCTCCGCAGGGCCGAGGAGGccgaggaggaagaggagttgaAGAAAAGTGCCCTAATCAACTGGTATCTGAAGGAGATGGAGTCAGAGATCGACTCGGAAGAGGAACTGATCCACAAGAAGAGCCTGATAGAGAAAGTCCTGCACAGACTAGTGCACTACgaTCATATCCTGATAGAGCTGTCTCGGGGAGGGCTGAAAGGGTCAGAGGCGGAGGCACAGGAAGAGGTTCTGGTCGTCAACCCCAACTACACTCTGGAGGACTAAACTCAtcccctccaactccctccctagCACTTTCCCCCTCCTTCTCAATCGCCTCTTTCTAGAACTTTTACGTTTGGACTCCAATTCAAGACTCTGTGAAGTTGTTTTTTGTTGAATGTTGGTCAGTGTAATTACATTCTCAACATTTGTCATGTTTTAATTGTATTGCTGCTTTATAGAGTTTTTAAACGACTCTACCCTGTTTTAAGCCTTGTATTTGTATTGGTGTAGCCAGGTGAATAATGTAAATATGTTGCTCTGATTTCTCCAGAGCGTTTACTGGCGTATGGCTGTTTGTGGGTCTCCTCAGTTAACATGATGTTAATCCTGACTAGCATGGTTTTACCTCCCATGTTAAATGTATGTGTGAAAGAACACACACAAATTAAAGTCTACCCTTTTGATGCA

Function

NR:

description
Zygotic DNA replication licensing factor mcm6-B

GO:

id name namespace
GO:0032508 DNA duplex unwinding biological_process
GO:0006270 DNA replication initiation biological_process
GO:0042555 MCM complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003678 DNA helicase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966386.1 True 3267 mRNA 0.53 17 9454427 9465088

Neighbor

gene id symbol gene type direction distance location
si:ch73-71c20.5 LOC103478929 coding downstream 628 9447716 ~ 9453799 (-)
casp8 casp8 coding downstream 13393 9423413 ~ 9441034 (-)
trnae-cuc-378 NA coding downstream 59793 9394563 ~ 9394634 (-)
trnae-cuc-377 NA coding downstream 60434 9393922 ~ 9393993 (-)
trnae-cuc-376 NA coding downstream 61075 9393281 ~ 9393352 (-)
LOC110508468 LOC106600218 coding upstream 34941 9500029 ~ 9540206 (-)
LOC110508470 LOC106600228 coding upstream 114162 9579184 ~ 9599623 (-)
LOC110508471 LOC106600234 coding upstream 164056 9629144 ~ 9675219 (-)
LOC110508473 LOC106600236 coding upstream 274050 9739138 ~ 9883971 (-)
LOC110508157 LOC106569426 coding upstream 432685 9897773 ~ 9937313 (-)
G2102731 sugt1 non-coding downstream 199261 9231694 ~ 9255166 (-)
G2102736 NA non-coding downstream 302027 9150479 ~ 9152400 (-)
G2102729 NA non-coding downstream 310695 9129789 ~ 9143732 (-)
G2102112 NA non-coding downstream 398061 9055019 ~ 9056366 (-)
G2102863 LOC106600212 non-coding upstream 7541 9472629 ~ 9474007 (-)
G2102903 NA non-coding upstream 77036 9542124 ~ 9547321 (-)
G2102992 NA non-coding upstream 257483 9722571 ~ 9727884 (-)
G2103001 NA non-coding upstream 288849 9753937 ~ 9754330 (-)
LOC110508459 LOC106599937 other downstream 274277 9154717 ~ 9180242 (-)
LOC110508274 LOC106600446 other downstream 476328 8976699 ~ 8978156 (-)
LOC118936616 LOC106600091 other downstream 972014 8480324 ~ 8522153 (-)
G2101464 NA other downstream 1214574 8238144 ~ 8239853 (-)
G2102910 nop9 other upstream 102878 9567966 ~ 9569051 (-)
G2103015 NA other upstream 311531 9776619 ~ 9776908 (-)
LOC110508476 LOC106600265 other upstream 539138 10004226 ~ 10007929 (-)
G2103203 LOC106600278 other upstream 648340 10113428 ~ 10115397 (-)

Expression


Co-expression Network