LOC110508491 (LOC106600322)


Basic Information

Item Value
gene id LOC110508491
gene name LOC106600322
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10301488 ~ 10306620 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589038.2
TTGGCGCGAGACGCTGAGCGAACTTGGTGATGGAACGTCAGAGACACGCCCCCAGCTTCTCCTACCATGTGGTTGatataaacacagttcactttcgtGACAAGCTTTTTGgcttcaacattttcttaactgtGCGCTCATTAACAGCTGTCAGCATGTCTGTGTCCGTCGACGTGAATTTTCAAACCCAGATTGTGTCTGTTTTGGATTCACTTACAAAGGTGGCCGTCGTGGAAATAACGAAACTGTTCGAGTGTCAATTCCTTGCTAAAGGAACCACCGTTCTCATTGAAGGGCAGACAGAGCAAAATGAAATCCTGCAAACGGTGGACTCTGTCAAAAAGTCAGGCAAGAAATGTCTTCGCAGTATCGGAGTTCAAGTGGATGAGGAGTTAACTGCCCCAAAACAGTGCTCCTTCTCAAAGGTGAGCAGTGAGGAGGGTCCTGCACATCATATCACCCTGCTGGAGGCTAATCAGCCTGCTGACCTAAAGTGCTATGTTCTAGAACACAAGGATGTGGAGATGGTGAAGGGGAGCAGTCTGGAACCAGAATCCCCAACAACCACTGAGACAGAAGGAGAACAAGTTATATATTCCACCCCTAAGTATCCAAACCACCTCTCTGGTACTGTTCAAAGCTCCCCAACTAAGCAGAAACTCCAGCCCCTCAAGACAGAATCAGAGAATGGAATGAACACAGAATGGGTGACTAAAGTCTTCTGTCCAATGGTCCCAAAGGCAGAAGAGCAGTATTCAACACCACAGGCAAATTGTAAAGAAAAGCCTATCCAGGTGGAGCCCCAGCAGGCCAGTGTCAGCACCGCAAAGGAGACAGCCTATAGCCCGTCCACCTCAGATGGTGCTTTGGCTCCTGAACAGGCTAAGAGAAAGTTGACATCTATGGGTGCATTGGACCCTCCCTCTGCGGTGAAGAATAAAAAGGTGGACTTCAAGCTGGACCAGACCTCCCTGGAGCACAAATTGACGAGGGCCTGCTCAGTGCTGCTGGTGAACCTGCTTTTGGTGCCTGGAGGGAAGAAGGCTAATGGGAGCTACTGTCACAACAGCAAGAGGTTCCCCATGCCCAAGGACCTCAAGACCCACCAGGGCCTCCACACAGGCCGGCGCCTTTGCTGCTTCACTCAGTGTGGGAACGATGTCTGGCGGCTTCAAAGCGTCCTCTCCCCGAGCCACTCCTACGGTTGCAAGATCTGCGGGAAGAGTTTCAAACGCAGGAAGATCTTGAGGAGGCACGAGCGCTTCCACAACGGGGAGAAGCCCTATTCATGCTACCAGTGCTCAAAGATGTTCGCCCTGCGGAAAAGCCTCCGCAGGCATGAGAGGTTCCACACGGGGGACAAGCCTCACAGCTGCCTCCAGTGTGGGAAAAGCTTCCGGCTTAGGGACAATCTGAAGGCTCACCTGCGCTTTCACACAGGTGAGAGACCTTTCACCTGCTCCTTCTGCTCCAAGAGCTTCAGAATCCTcaggaaccttgaggaacacagcGTTGATCACTTGGGAGTGACAGCGAAGTAGCTCACTTTCCGACAAAGAGAGCTGTTCCTAAGCATTAGCACCTAGCAGCCTTTATCGGCTGGTTGTGTAAGCCGCATTACAAAGCTTATCTACCTCTAACGGAAACTACTAAATGTCCATTCCTCATTTATAACCTATCATTCAGCATTGGTTGTTTTTGAACGATACTATGATTGTAAATAACCATTATGACGGAAGATGGGGAGGGTGGAAAGATCTGAAATGAGGCAGTCAACCATCCTGCGTAGGTTTGGATTGTCCAGAATGATCATCTGAGTAAAGCTTTAGTGGACACTGATGTTATTAATAGCCATAATGTTTTTCCAGGCACCGATTATGCCTAGTCCTAAACCAAAAAGTTATTGGAATGGAGATTTTGTATTGAGCATGCTGGACTAGGCTTTAATCTGGGTCTGGAAAACTGGCCCTAGGTCTTTACACTGTATTTCTTTGGCCAAAACACTATGGACATGGAACTGTTGCATGTCTCTTTGAAGAATACATAGGCCAGGGCTGAGCTTAGTGTGAGGTCTTTCTCAGACAATCTGTTTTCATGATACATCTTTTCACTTTGTAGTAAATACAAACAGATTGTTCCTTTGTGTATTTTGGTTTGTAAGTAGTTGTAAAGGTAGGCTTAAATTTGCATGTTTGTTTTATACTTTTATCTTGAACCATTATGCCAAATACTATAGTAATGCAGCAACTGTCTCTCCTTATCTTTGTTCATAATGCTGTTTTTGTCAGGAAAACACCATACTTAAACTTCCCTGACATCTACACAGGAAAAAGTATCTAAAGACACATGACTTAGTTTAAAATTAAAAGAATGGGAAGTATGATGCAGCCTTTAATTTTGCAAATACACATTTGAATGTAATCTGTAGAGAGAAGTTATTTCATATCATTTTTTGATTGAAGCTGATGTCTCTGACTTGTGATTTGTTGAAGATATAACAAATATGACTACATGGCTTTTAATTATAATCCAaaattgtttggggggggggagaatgttcatccattttagaataaggctgtaacataacatgtggaaaaagtccaggggtctgaaaactttcctaatgcactgtaattCCCTGCGTTTGTGTGAAAAGGTCAGTTTTATGGTATGTACTGTGGTTGGCCCTTTTGTCTGGCAATAAAAAAACACCACTTGTATTATTGATTTCACTAATGCCTTATAAAAATTGACACATCAGAAGTGTCTGGTTGTGTGAA

Function

NR:

description
zinc finger protein 773-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589038.2 True 2783 mRNA 0.45 4 10301488 10306620

Neighbor

gene id symbol gene type direction distance location
LOC110508490 LOC106600323 coding downstream 120 10292011 ~ 10301368 (-)
LOC110508487 NA coding downstream 56698 10237355 ~ 10244790 (-)
LOC110508484 LOC106600289 coding downstream 106023 10178396 ~ 10195465 (-)
mmp14b LOC106600280 coding downstream 126645 10152976 ~ 10174843 (-)
dhrs1 dhrs1 coding downstream 225060 10068866 ~ 10076428 (-)
LOC110508492 LOC106600326 coding upstream 91 10306711 ~ 10323084 (-)
LOC110508496 LOC106600349 coding upstream 80733 10387353 ~ 10414640 (-)
LOC110508497 LOC106600370 coding upstream 111907 10418527 ~ 10463830 (-)
LOC110508159 LOC106600382 coding upstream 198094 10504714 ~ 10508349 (-)
LOC110508501 LOC106600384 coding upstream 228406 10535026 ~ 10540345 (-)
G2103629 LOC106569449 non-coding downstream 13608 10285253 ~ 10287880 (-)
G2103649 NA non-coding downstream 68412 10232818 ~ 10233076 (-)
G2103647 NA non-coding downstream 69908 10231362 ~ 10231580 (-)
G2103639 NA non-coding downstream 78963 10222297 ~ 10222525 (-)
G2103627 NA non-coding downstream 89541 10211731 ~ 10211947 (-)
G2103695 NA non-coding upstream 18338 10324958 ~ 10325299 (-)
G2103707 NA non-coding upstream 25040 10331660 ~ 10339065 (-)
G2103696 LOC106600329 non-coding upstream 34961 10341581 ~ 10385478 (-)
G2103735 NA non-coding upstream 79619 10386239 ~ 10386822 (-)
G2103736 NA non-coding upstream 90165 10396785 ~ 10397069 (-)
G2103257 NA other downstream 94812 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 186091 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 293585 10004226 ~ 10007929 (-)
LOC110508473 LOC106600236 other downstream 489630 9739138 ~ 9883971 (-)
G2103015 NA other downstream 524580 9776619 ~ 9776908 (-)
G2103920 NA other upstream 401392 10708012 ~ 10708499 (-)
LOC110508522 NA other upstream 579578 10886198 ~ 10894141 (-)
G2105419 LOC104953893 other upstream 1192506 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 5233148 15539768 ~ 15554897 (-)
G2109705 NA other upstream 5297065 15603685 ~ 15604463 (-)

Expression


Co-expression Network