LOC110508523 (LOC106600405)


Basic Information

Item Value
gene id LOC110508523
gene name LOC106600405
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10905527 ~ 10911512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589089.2
TGACCGCTGCCTCTGCGACGAAGTTTGGAGCAGAGCCGATCAGCGGTAATGAGAAACGTAGCTGGAAATGACAATCTTCATTTTTTTGCAGAATTGCTTTTGTGATTAAATGTATTGAACGAATTACGAGTTTGGCGTTGATAATATTATCTCAAACTGGACTAATTAATAATTCTGCTACTGAACTGTCTAATCTGAAGTAGGACGCATAGGCTCCTAAAACAAATCGCCATTGTGATCCCTTCACTCTGGTGCAAGAGAAAGTTGTATTTTTTACGCATCGTGAGAAAGGGAAAGGTATCCCACAAAACGATTAGGAATTTAAACGTTTGGAACGGGATGTTTTATCCCTCTTGAATCCTATTCTACGTCGAAATGGATCAGGCACCTCCAGctctccctcCTAGGTCAACAAAGCCCATGACCTCCTCCATGAGCCACAACTGCCTCAGGGAAGCCCCAGTCTTTCCCCTGCAAGATGCCGAGTGGTACTGGGGAGACATTTCCAGGGAGGAAGTCAACGAGAAGCTCTGCAACACACCTGACGGTTCCTTCCTAGTTCGTGACGCTTCCACTAAGACACAAGGAGACTTCACGCTAACGCTGAGGAAAGACGGCCACAGCAAGTTGATAAAGATCTACCACCGCGAGGGGAAGTACGGATTCTCAGAGCCCCTGACCTTCAGCTCCGTGGTGGAGCTCATCTGGCACTACCAGCACCATCCTCTGGTGGAGTACAACGCTGTGCTTGACGTCATGCTCACACACCCCGTATCCCGCTTCCAACAGGATGAGCTGGTGGAAGAGGACAGTGTTGACGTGGCTGGCAGGAAGCTCCAGGAGTACCACAGTCAATATCAGGAGAAGAGTCAAGAATTTGACCGTCTATACGAGGCCTACAGTAAAACCTCACAGGAGATCCAGATGAAGAGAACAGCGATAGATGCCTTCAACGAGACCATGCTGATCTTCGAGGAGCAGTGTCGTGAGCAGGAGCGTTACGGGGAGGAGTGTGAGAGGAGCAGTCGATCTGAGGGAACAGAGAAGGACCTGGAAAGCTTCCTGATGAACTATGAGAAGCTGAAGTCTCGGCTGGGGGAGATCTACAACAGTAAGGTCCACCTGGAGCAGGACTTGAGGTCCCAGGTCCAGgactatagagagacagacaggaggatcAACAGCCTCAGGCCTGACCTCATAGAGCTACGCAACATAAGGGACCAGTACTTCAATTGGCTGAATCACAAAGGTGTGCGACAGAAACGCATTAACGATTGGCTGGGGATCCAAGACGATAGCAGTGATGACACCTATGTGTTGAAGGGGGAACGGGAGAAGCTGGCGCACCATGATGAGGGGACCTGGTTCGTGGGAGAGCTGAGCAGGACGCAGGCTGAGGAGATGCTGATGGACAAACCCACCGGAACCTTCCTGATCCGAGAGAGCAGCAAGCAGGGCTGCTACGCCTGCTCTGTGGTTGTGAATGAAGAAGTAAAGCACTGCATGATCTACAGCACGCCACGTGGTTACGGCTTCGCTGAGCCCTACGACCTCCACTGCTCTCTGAAGGAGCTCGTTCTGCACTACCGCCTCAACTCCCTGGCACAGCACAACCAGGCCTTGGACGTCCGGCTGGTGCACCCCGTCCACGTCACCCCTGTCTCGTCAGCTTCGCCCCGCACAGCCACAGAGGATTGCCTGCGACTAAAGACAGAGGAACACCATCTTCTACAGACTTCTACTAAACTACCCGCGGGACTCCCCGCAGCCGCTCCAGAGATGTAGACAAGACGGCTGTGGGACCTGTTTGCGCTCTGTAGCTATCCTAGTAGGACAACTTGAGGGCGGATATGCTTGCGTACTGACGCAACTTGAGGGGCAGATGTGTTTGCTTTAGTGAAGCAACTTGAGGGGGCGGACGTGTTTACGTACTGAAGCTATTCTACGGATTTGCACTAGGATGATTCCAACAGATTTGTGAATGTGATTTCACTTGATTGGAACTTTGACCAGAACTTGAATGTCAGCTGGGactttgttttttataagattcTGTTTGCTATTGttattggtttgtttgtttgtttgttttgtaccCATTTTTTCACCTTTTCTTTTATGGGATACCATTTGTTTTCATTAGTGGGCCTGGTCATCCAGTGGATGACTGACTACATGTACTATATCATAATATGTTTATATTTGTCAGGTGCTCTTTTTTATTTGGACTTCCAGGGCCCCATTTTGACAACACAAAGAACTGGTGCTAATATAAAATGAGACCGTAATACACCCAATACCTTGGAATTTCGATGTATTTTCAAATACGTGTTAATTGGTGTGATGTCCATGCACGGCAGATCATTAAAGTGGGTTTAGGATATAATGGTGCAGGAAAACAAGATGGCTGACTCGGTGGCGTAGTTAGCTGTGGTACGTACCAAACTCGTTCTGAGTATTTGAGTACGTAGTCATGCAACTATAGGAACTGATGTAGCGCAATTTGACAGTAGCGCTGATTTTTTTCTGTTGTCAAATTATAACCCAGTTATCAGTTGATCTACTGTACTGAATGTAGCATAAACAATTTTCAATATATTCTTAGAACAAACAACATTCTACATATTGTACCCAATAACCAAAGCACTTGTTATTAGTGAGAAAATATGTGTCCCGACCAGAAAATTCCGTTTatggtgatggggggggggggggggggggtggaaacacaccacacaTGTGCTTGATCAAAACATAAATGGACTGTACGTTATATTCTGTTACTCAAAGTATAAGCTTTTTGTATttttagatatatatttttttctgaaaTATGCCACAGGAGATGAAAGCTTGAGGAAAGTGCAATCCAACAGTATTTGTAATGTTAGAATTGAATGATTATGATTATCGGGGGTCATCAGCATTTGCCATAGAAATGCACTAACTCTTGATTGGTGGCATTATTCATCTGATGATGTGACCTTTTTAAGAACGTTTTTGTGTGAACTGCCAGAGGTGCGGAAGTGTTAATTCTGTCTCTACTACTTGAACTGTGGCATTGCTCAATACAGGCATTGAATGTTTCCTCGTGACATATAGGCCTACATAGCTTAAGAGGAAAGGAATCCATGTTGTTCTTGGCACATTTGTCAAGTTTGAGGACAATAGACACTTTGTATTGAGATACtgtaaaacttgttttttttttttgtggttggTTCGATGGAAGGTGTTTTAGTCTCTCTTAAAAACTTGACGGGAGGATTGAGGAAACTCCTTGGGCGACGTTAAGCAATATGAGATTATTAAAACCTTTTCTTGCTGAAAGACAATAAACTGATGAGGGTTTTCCTTTTGTA

Function

NR:

description
phosphatidylinositol 3-kinase regulatory subunit gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589089.2 True 3365 mRNA 0.46 7 10905527 10911512

Neighbor

gene id symbol gene type direction distance location
LOC110508522 NA coding downstream 11386 10886198 ~ 10894141 (-)
LOC110508520 LOC106600403 coding downstream 20937 10869116 ~ 10884590 (-)
LOC110508519 LOC106600402 coding downstream 52653 10845215 ~ 10852874 (-)
LOC110508508 LOC106600390 coding downstream 213282 10689183 ~ 10692245 (-)
LOC110508509 LOC106600390 coding downstream 223780 10677802 ~ 10681747 (-)
LOC110508524 NA coding upstream 61258 10972770 ~ 10985411 (-)
LOC110508527 LOC106600407 coding upstream 79583 10991095 ~ 10994103 (-)
LOC118944867 NA coding upstream 115529 11027041 ~ 11028427 (-)
LOC110508529 LOC106569411 coding upstream 125686 11037198 ~ 11063179 (-)
LOC110508530 jun coding upstream 178004 11089516 ~ 11091825 (-)
G2103993 LOC106600392 non-coding downstream 70880 10832777 ~ 10834647 (-)
G2103897 LOC106600396 non-coding downstream 81171 10737947 ~ 10824356 (-)
G2103970 NA non-coding downstream 94986 10810038 ~ 10810541 (-)
G2103894 LOC106600393 non-coding downstream 148190 10720152 ~ 10757337 (-)
G2103921 NA non-coding downstream 196354 10708832 ~ 10709173 (-)
G2105123 NA non-coding upstream 42241 10953753 ~ 10953984 (-)
G2105190 NA non-coding upstream 161678 11073190 ~ 11073427 (-)
G2105194 tada1 non-coding upstream 167182 11078694 ~ 11078982 (-)
G2105195 NA non-coding upstream 167690 11079202 ~ 11079927 (-)
G2105197 NA non-coding upstream 169222 11080734 ~ 11081223 (-)
G2103920 NA other downstream 197028 10708012 ~ 10708499 (-)
G2103257 NA other downstream 698851 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 790130 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 897624 10004226 ~ 10007929 (-)
G2105419 LOC104953893 other upstream 587614 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4628256 15539768 ~ 15554897 (-)
G2109705 NA other upstream 4692173 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 4791824 15703333 ~ 15793545 (-)
G2110939 NA other upstream 5887878 16799390 ~ 16799869 (-)

Expression


Co-expression Network