LOC110508524


Basic Information

Item Value
gene id LOC110508524
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10972770 ~ 10985411 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966953.1
aaagttcaagggggccgaatactttcgcaaggcactgtatacagtatgtatactgtagctaagaaagtaatactatgtGAATGTTGTGTTGTAAGCGGTTACTAGCCCATGTGCcttaccctaataatttggtcaattttcacctcttaatttcgcaAAATTACAGAATGCCTCTTATCCACTCAtcattcccttatgccataggttgtacatctcaattgtcagtagaaaccacatttgtttaagcaagtcagccatatcagctgtcttttaaaaaggcagtaaacaaggctgaatgaactgtttcgctgccagacaaggctcagcTGATACCACCGCTTCACCTGgctaaggattcactccatggtgctgatgcggGGCCTGCacttcctcttctctgtcctcccagTAGAGGAGATTCTGACCAGCCTGACCTCCCTTATCAACCCTCACGTCCAGAGACTAGACACACTGGCACATCAGGAGCCCAGCCCCACTACTAAGCTATGTATCATCCACATGCTGGGCATGCTGTCCAGTCTGTTCACTATGCTGGACATCAGGGGTCAGAGGGCACCACCCCAGCCCAGGCCAGACCCCAACCCTGTGGTGTTGGTCTTACAGTGGCTCAGACTCAGAAGTGGTGAAAGCAGTTGGAGGCCAGTCTCCCCTCTGTCTGACAGAGCACTTCTCTGAGGTGCTGTTCGGTCTGAACAATGAAGTACCTAACGGCCCTGCTACGCTATAGCCATCGGGCGGAAGGCATTGCCATCAGCCATTGAGGAAATGCTTCCTCTGAAATCAATGAAAGCTGCTTCACTGACCATGTTGCGCTCACGTTGTGTCACGTCCAATGTGAGCATTCAAGCAATGAGGTTCAATTCTTGATGGTTGATGTGTTCATGCTATCTGTGAGTTGAAATAACAAGTAATAAAGTTGATTTGGGTTGCATATggcctccactagacaccactggttattttACAAAGATTTGTGAAGTCAATAAGCTACGAGCTAGCACAACTCTAGCTAACTAGTTACATTGACTATTTTCGTAATGTAAACAAAAGCAACTTGTAAAGGCAAAAATCATGACAAGTTTGCAAGCGGAGTTTGAATAAGACATCCAATTAACACTTTGCATTTATAACAGTTGGTTTAACTATATCTAATAATTAACCAAATCATTGATGGATCAATAGATAAAATAAATGTATGAGTCTCATCTGCCCCTGCAAGCTGGTCGCCATACACTCCCTCATCTGATTGGTAGTTTCGCACAAACAGTAAACCGGCATCACACTCCCTCATCTAATTGGTTGAGTAGATGGGCCTTCGGACATTGTGCTAAAGGCGCCCACCAGTGGCCAATGTCGCCCCTATTTTGACTTAACTTCTGCTATAGGACAGGAATGTTCCTTTATGTTCCACTAGAGGTCTTCACGGGTCCAAAAAGTTGGACCTTTTCCGAAATGGATCCATGGCTTTCCCACCCGACCCGATATGCATAAATTATCACTCTTATAACGGAGACCTGTTCCAAAAAGGAAAACCAGACCCAA
>XM_021589090.2
GCCCTACACAGGCAGAGTTATAGATCTGTGGTAAAGATTCACTATGTTTAAATGATTGTAAGAAAATTATATAGACctgacacaggaggttggtggcactttaGTTGGGGTTGATGGGCTTGTGGTAATACCTGGAGCGGAGTTAGTGGAATGGTATCGCACAGGACAATGAACGCTGAAAACCTTTTCCCGACAACTCACTTTTGACCTTGACTAGGCTAGCTTATTGGCAGGGGCCACCTCTGTGTCATCAACAGCATTGACTGATAGAGGGAGACTTTTTAAAGCCCACGAAATGTGGGCGGCAGGCGCAACAACATAAGCGTGGACATGAGCGGATTTGCTCCTATAGCCAACAGTAGAGCCCCAACCCGGTGTCATAAGAATTAACCGTGGAGAACGTTGAGGGGatgcggGGCCTGCacttcctcttctctgtcctcccagTAGAGGAGATTCTGACCAGCCTGACCTCCCTTATCAACCCTCACGTCCAGAGACTAGACACACTGGCACATCAGGAGCCCAGCCCCACTACTAAGCTATGTATCATCCACATGCTGGGCATGCTGTCCAGTCTGTTCACTATGCTGGACATCAGGGGTCAGAGGGCACCACCCCAGCCCAGGCCAGACCCCAACCCTGTGGTGTTGGTCTTACAGTGGCTCAGACTCAGAAGTGGTGAAAGCAGTTGGAGGCCAGTCTCCCCTCTGTCTGACAGAGCACTTCTCTGAGGTGCTGTTCGGTCTGAACAATGAAGTACCTAACGGCCCTGCTACGCTATAGCCATCGGGCGGAAGGCATTGCCATCAGCCATTGAGGAAATGCTTCCTCTGAAATCAATGAAAGCTGCTTCACTGACCATGTTGCGCTCACGTTGTGTCACGTCCAATGTGAGCATTCAAGCAATGAGGTTCAATTCTTGATGGTTGATGTGTTCATGCTATCTGTGAGTTGAAATAACAAGTAATAAAGTTGATTTGGGTTGCATATggcctccactagacaccactggttattttACAAAGATTTGTGAAGTCAATAAGCTACGAGCTAGCACAACTCTAGCTAACTAGTTACATTGACTATTTTCGTAATGTAAACAAAAGCAACTTGTAAAGGCAAAAATCATGACAAGTTTGCAAGCGGAGTTTGAATAAGACATCCAATTAACACTTTGCATTTATAACAGTTGGTTTAACTATATCTAATAATTAACCAAATCATTGATGGATCAATAGATAAAATAAATGTATGAGTCTCATCTGCCCCTGCAAGCTGGTCGCCATACACTCCCTCATCTGATTGGTAGTTTCGCACAAACAGTAAACCGGCATCACACTCCCTCATCTAATTGGTTGAGTAGATGGGCCTTCGGACATTGTGCTAAAGGCGCCCACCAGTGGCCAATGTCGCCCCTATTTTGACTTAACTTCTGCTATAGGACAGGAATGTTCCTTTATGTTCCACTAGAGGTCTTCACGGGTCCAAAAAGTTGGACCTTTTCCGAAATGGATCCATGGCTTTCCCACCCGACCCGATATGCATAAATTATCACTCTTATAACGGAGACCTGTTCCAAAAAGGAAAACCAGACCCAA

Function

NR:

description
importin-13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966953.1 False 1563 mRNA 0.45 5 10972770 10975408
XM_021589090.2 True 1601 mRNA 0.46 5 10972770 10985411

Neighbor

gene id symbol gene type direction distance location
LOC110508523 LOC106600405 coding downstream 61258 10905527 ~ 10911512 (-)
LOC110508522 NA coding downstream 78629 10886198 ~ 10894141 (-)
LOC110508520 LOC106600403 coding downstream 88180 10869116 ~ 10884590 (-)
LOC110508519 LOC106600402 coding downstream 119896 10845215 ~ 10852874 (-)
LOC110508508 LOC106600390 coding downstream 280525 10689183 ~ 10692245 (-)
LOC110508527 LOC106600407 coding upstream 5684 10991095 ~ 10994103 (-)
LOC118944867 NA coding upstream 41630 11027041 ~ 11028427 (-)
LOC110508529 LOC106569411 coding upstream 51787 11037198 ~ 11063179 (-)
LOC110508530 jun coding upstream 104105 11089516 ~ 11091825 (-)
LOC110508163 LOC106569415 coding upstream 158072 11143483 ~ 11145238 (-)
G2105123 NA non-coding downstream 18786 10953753 ~ 10953984 (-)
G2103993 LOC106600392 non-coding downstream 138123 10832777 ~ 10834647 (-)
G2103897 LOC106600396 non-coding downstream 148414 10737947 ~ 10824356 (-)
G2103970 NA non-coding downstream 162229 10810038 ~ 10810541 (-)
G2103894 LOC106600393 non-coding downstream 215433 10720152 ~ 10757337 (-)
G2105190 NA non-coding upstream 87779 11073190 ~ 11073427 (-)
G2105194 tada1 non-coding upstream 93283 11078694 ~ 11078982 (-)
G2105195 NA non-coding upstream 93791 11079202 ~ 11079927 (-)
G2105197 NA non-coding upstream 95323 11080734 ~ 11081223 (-)
G2105144 NA non-coding upstream 98843 11084254 ~ 11084790 (-)
G2103920 NA other downstream 264271 10708012 ~ 10708499 (-)
G2103257 NA other downstream 766094 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 857373 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 964867 10004226 ~ 10007929 (-)
G2105419 LOC104953893 other upstream 513715 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4554357 15539768 ~ 15554897 (-)
G2109705 NA other upstream 4618274 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 4717925 15703333 ~ 15793545 (-)
G2110939 NA other upstream 5813979 16799390 ~ 16799869 (-)

Expression


Co-expression Network