LOC110508527 (LOC106600407)


Basic Information

Item Value
gene id LOC110508527
gene name LOC106600407
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10991095 ~ 10994103 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589096.2
TACGTTAAAGTGCCACGCCTCTCATGTGTGTTAATTTTGTGACTCATCTATGCAGGAGCATACCAGGAAGGATTACTGACAGGAAGAATACAGACAATTTGCGAACATTATTGAGATCATCATCTACAGGCTATGCATTTTCCTCTTGCAGATCAGTGCCAAGATGGTTGTGCTGTCTAAAGAATATGGGTTTGTCGTTCTCACTGGTGTTGCCAGCATAGTCATGATCGGCCACCTCGCCGTGAAAGTTGGCAAAGCCCGCAAGAAGTACCAGATCAAATACCCTCAGATGTACAGCGATGACCCAGATACCGGAAATATCTTCAATTGCATCCAGCGGGCCCATCAGAACACCCTGGAGATCTACCCCGTCTTCCTTTTCTGTCTCACCATCGGTGGCCTGCATAGTCCTCGCCTAGTCAGTGGTCTTGGAATGACTTGGGTTATAAGCAGGGAGATCTACGCATACGGATACTCCACTGGAGATCCTAAGAAAAGGATGCGCGGGGCATTCGGGAACATTGCTCTGCTGGGCATGATGCTGATCGTAGCCAACTTTGGCAGAACCCTGTTGGGCTGTGGTGACTGGGTGTGGTCTGGGATGAGACCGGGGATGAGGTTCTCAGCTCCCCTTCCTGCTACCATTCCCCAGTGAGGTACTGCAACCCCATCCGACCCCAATCTAATAGTAGTAGAATGTCTCTTGTGGGCATCCATACATGTGTATGGCATATGTAGAAAGACCGAGTTCAGTAAACGTGGAAACAGACAACCACTGATGTTTGTGCCTCATTCCATGCTACACCACCCCAACTCCTCCCTGACCCACTACTGAACACTGACAGGCCCAGAGAACCTTCTGCGACGAACGACAGAGGCGGCACATGCTTCACCACGTTGATGAACCTATTCTTTGTGAGCGTGATGTTTTAATAAATATATTTGCCAAAACTGTATTCTTAATGAAATAATAATGTATAAAATGACCATAATGACTTTAA
>XM_021589095.2
GGCCCGTGAACTCTACCCCACTACGTTAAAGTGCCACGCCTCTCATGTGTGTTAATTTTGTGACTCATCTATGCAGGAGCATACCAGGAAGGATTACTGACAGGAAGAATACAGACAATTTGCGAACATTATTGAGATCATCATCTACAGATCAGTGCCAAGATGGTTGTGCTGTCTAAAGAATATGGGTTTGTCGTTCTCACTGGTGTTGCCAGCATAGTCATGATCGGCCACCTCGCCGTGAAAGTTGGCAAAGCCCGCAAGAAGTACCAGATCAAATACCCTCAGATGTACAGCGATGACCCAGATACCGGAAATATCTTCAATTGCATCCAGCGGGCCCATCAGAACACCCTGGAGATCTACCCCGTCTTCCTTTTCTGTCTCACCATCGGTGGCCTGCATAGTCCTCGCCTAGTCAGTGGTCTTGGAATGACTTGGGTTATAAGCAGGGAGATCTACGCATACGGATACTCCACTGGAGATCCTAAGAAAAGGATGCGCGGGGCATTCGGGAACATTGCTCTGCTGGGCATGATGCTGATCGTAGCCAACTTTGGCAGAACCCTGTTGGGCTGTGGTGACTGGGTGTGGTCTGGGATGAGACCGGGGATGAGGTTCTCAGCTCCCCTTCCTGCTACCATTCCCCAGTGAGGTACTGCAACCCCATCCGACCCCAATCTAATAGTAGTAGAATGTCTCTTGTGGGCATCCATACATGTGTATGGCATATGTAGAAAGACCGAGTTCAGTAAACGTGGAAACAGACAACCACTGATGTTTGTGCCTCATTCCATGCTACACCACCCCAACTCCTCCCTGACCCACTACTGAACACTGACAGGCCCAGAGAACCTTCTGCGACGAACGACAGAGGCGGCACATGCTTCACCACGTTGATGAACCTATTCTTTGTGAGCGTGATGTTTTAATAAATATATTTGCCAAAACTGTATTCTTAATGAAATAATAATGTATAAAATGACCATAATGACTTTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589096.2 False 1001 mRNA 0.47 6 10991095 10994082
XM_021589095.2 True 1000 mRNA 0.48 6 10991095 10994103

Neighbor

gene id symbol gene type direction distance location
LOC110508524 NA coding downstream 5684 10972770 ~ 10985411 (-)
LOC110508523 LOC106600405 coding downstream 79583 10905527 ~ 10911512 (-)
LOC110508522 NA coding downstream 96954 10886198 ~ 10894141 (-)
LOC110508520 LOC106600403 coding downstream 106505 10869116 ~ 10884590 (-)
LOC110508519 LOC106600402 coding downstream 138221 10845215 ~ 10852874 (-)
LOC118944867 NA coding upstream 32938 11027041 ~ 11028427 (-)
LOC110508529 LOC106569411 coding upstream 43095 11037198 ~ 11063179 (-)
LOC110508530 jun coding upstream 95413 11089516 ~ 11091825 (-)
LOC110508163 LOC106569415 coding upstream 149380 11143483 ~ 11145238 (-)
LOC110508539 NA coding upstream 465270 11459373 ~ 11464078 (-)
G2105123 NA non-coding downstream 37111 10953753 ~ 10953984 (-)
G2103993 LOC106600392 non-coding downstream 156448 10832777 ~ 10834647 (-)
G2103897 LOC106600396 non-coding downstream 166739 10737947 ~ 10824356 (-)
G2103970 NA non-coding downstream 180554 10810038 ~ 10810541 (-)
G2103894 LOC106600393 non-coding downstream 233758 10720152 ~ 10757337 (-)
G2105190 NA non-coding upstream 79087 11073190 ~ 11073427 (-)
G2105194 tada1 non-coding upstream 84591 11078694 ~ 11078982 (-)
G2105195 NA non-coding upstream 85099 11079202 ~ 11079927 (-)
G2105197 NA non-coding upstream 86631 11080734 ~ 11081223 (-)
G2105144 NA non-coding upstream 90151 11084254 ~ 11084790 (-)
G2103920 NA other downstream 282596 10708012 ~ 10708499 (-)
G2103257 NA other downstream 784419 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 875698 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 983192 10004226 ~ 10007929 (-)
G2105419 LOC104953893 other upstream 505023 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4545665 15539768 ~ 15554897 (-)
G2109705 NA other upstream 4609582 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 4709233 15703333 ~ 15793545 (-)
G2110939 NA other upstream 5805287 16799390 ~ 16799869 (-)

Expression


Co-expression Network