Gene
RNA
| Item | Value |
|---|---|
| gene id | thoc1 |
| gene name | LOC106600433 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 12222094 ~ 12230902 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: THO complex subunit 1-like |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| id | description |
|---|---|
| K12878 | THOC1; THO complex subunit 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589156.2 | True | 2251 | mRNA | 0.50 | 21 | 12222094 | 12230902 |
12,218,000
12,220,000
12,222,000
12,224,000
12,226,000
12,228,000
12,230,000
12,232,000
12,234,000
12,236,000
12,238,000
12,240,000
NC_048592.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508560 | LOC106600431 | coding | downstream | 92264 | 12019354 ~ 12129830 (-) |
| mib1 | LOC106600429 | coding | downstream | 227280 | 11906126 ~ 11994814 (-) |
| gata6 | LOC106600428 | coding | downstream | 378287 | 11836647 ~ 11843807 (-) |
| LOC110508552 | cables1 | coding | downstream | 435994 | 11754075 ~ 11786100 (-) |
| LOC110508549 | LOC106600425 | coding | downstream | 590353 | 11590108 ~ 11631741 (-) |
| LOC110508565 | LOC106600435 | coding | upstream | 14888 | 12245790 ~ 12248509 (-) |
| myl13 | LOC100194663 | coding | upstream | 279778 | 12510680 ~ 12515518 (-) |
| LOC110508569 | LOC106569331 | coding | upstream | 407609 | 12638511 ~ 12666401 (-) |
| ccdc13 | ccdc13 | coding | upstream | 446922 | 12677824 ~ 12688016 (-) |
| LOC110508576 | LOC106599876 | coding | upstream | 515117 | 12746019 ~ 12750292 (-) |
| G2105774 | NA | non-coding | downstream | 107801 | 12114026 ~ 12114293 (-) |
| G2105773 | LOC106600457 | non-coding | downstream | 109602 | 12112258 ~ 12112492 (-) |
| G2105769 | NA | non-coding | downstream | 116830 | 12105038 ~ 12105264 (-) |
| G2105721 | NA | non-coding | downstream | 162268 | 12018034 ~ 12059826 (-) |
| G2105867 | NA | non-coding | upstream | 39465 | 12270367 ~ 12285271 (-) |
| G2106000 | NA | non-coding | upstream | 251974 | 12482876 ~ 12483108 (-) |
| G2106001 | NA | non-coding | upstream | 252785 | 12483687 ~ 12484085 (-) |
| G2106002 | NA | non-coding | upstream | 253347 | 12484249 ~ 12484454 (-) |
| G2106003 | NA | non-coding | upstream | 254011 | 12484913 ~ 12485205 (-) |
| G2105419 | LOC104953893 | other | downstream | 722022 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 1328014 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 1513595 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 2015418 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 2106697 | 10113428 ~ 10115397 (-) |
| G2109663 | LOC106599735 | other | upstream | 3308866 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 3372783 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 3472434 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 4568488 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 5025306 | 17254319 ~ 17260420 (-) |
