LOC110508580 (LOC106599867)


Basic Information

Item Value
gene id LOC110508580
gene name LOC106599867
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 13066815 ~ 13081622 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589182.2
TCACGAGCCAAATAAACGAGTAATTCGTGAGCGTTTAGACCGCATACTATACATAAGACTTCCACAGCTCGTCTGGCAATCTGCAACCAAATCCATGTTTAAAGTTGACATAGAAAATAATCTAATTGTTTGATGAACGTGTTTCACAGTGGTAGCAGATTTAGCATTGCGAACTGTGCGTAATGAACGCCCCCAGCTAAATTAGCTATCTGCGCGCATGCGGATCGTGCAAACGCCAGAGAAAAAGCAGTTTGCAACGGTGTTGTGTACTTAGTTTTTCAaaagtttagctagctacatttcttcAAAATACTAAAAAGGCTACTCAACGTGCTTCTAACGTTAGCTTGTTATATAATCCAAGTGCTAGCTTTCTCGCCCGAGGCGAACGTGGAAGAGAACCAACCTGGCAGGACAGTCAGAAGGAAACTGCCTGGATGCAGATCAATACAGGGCCTAGCGCGCACGTGTAAACAAGCCTTTCATCGTTTAGCTTTATTACAACTCTGAAATAATGTTTGGTGCCTCGAGATCTGGGGGTGTAAGGGGAGGGCAAGACCAGTTCAACTGGGACGATGTGAAAGGCGACAAACACAGGGAAAACTACCTCGGGAACTCTCTTATGGCACCGGTGGGGCGATGGCAGAAAGGCAAAGATCTGACGTGGTATGCCAAAGACAAAAAAGGCGTTGTCAAGCCTATGTCAAGAGAAGAGGAGCTTGCCACTGTGAAAGCAGCAGAGCAAGAGGCACTGATGGCTGCCCTAGGCCACAAGAATATAAAGAGACAACCAACTGGCCTGACCAAAGAGGACCTTGCAGATGTGTgcaggagggaggatgtggaagCTGAGGACAGAGATGTGGATAGAGTCTCAGGCCTTGGAAGCTCTGGTGCAACGTCACGGAAAATGGTGTTCTCCCAAAAGGAGAAGGAAGCTGCCAAAATTGGCTTGTCAGTCTTCACACACCATAAAACAGAAGGGAAGTCTGGAAGCCAGGAAGCCTTCGCCAGAAAGATGTCTGAGAACACAGAGAAACAGGACATGGATCAAAGACATGAGAGCAgcaaaaagaagaaaaaggaaaagagaaaaaaaaaggaaaagaagaagaagcagaaaaGGCAGAGAAGagactcttcctcctcttcaggtTCAGACAATGACAGTAAAAGGCACAGAAAGGACCACCATCATCATAATCCATCATGCCTCAGTCAGACTGGAGCCAGACCCCATGACAGCCATTCAAGGGGGGGGCCAAAGGGCGAGcgccacccctcctcctcccaacGACGCCAGCAGAGGCATGACACAGACTCCTCCGACAGGGGGTCCCCTGTCCCTCGTCACCGTGCTAGCCACAAGGCAGCCCCTGCTGCTCCTACACAAAGCCACAGGCGGCGCCATGACACAGACTCGGACGATTAAGTTCCCCCCTAACCCCACAATCAGACACACGCAGAGGGAGAGGAGCCCTCTAGTCCACAGCAGAGCAGCTTGACTGGTCTATGGACTGTCCTCATGTACCTCTGGACTGGACTCAGTGGGCTGTGGTTGAGAGCAGTGTATCAATCTGTAGGCTACTCCTCAAACCACCCGCAGGCTTGTGGCCTTGTTGGAACTGATTGTCATTTTTATCTGTTGAATTTGTGTCTTGGTTAACTTATTCTGAACCAGTACAAATGTATTTTATGATCTAGCTACCAAAATTGAAGGACATTTTGCCACTATTCATGCAAGTAAATCAGGGACTAGTTAAGTACTGAAAGCAAGATAAGTAGATGTGTACTTGGTGCTGATATTAAGTTACTGTCAATAAAAACTATTGCTGTCCAAAATA

Function

NR:

description
multiple myeloma tumor-associated protein 2 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589182.2 True 1844 mRNA 0.47 8 13066815 13081622

Neighbor

gene id symbol gene type direction distance location
LOC110508577 LOC106599874 coding downstream 98676 12934237 ~ 12968139 (-)
LOC110508576 LOC106599876 coding downstream 316523 12746019 ~ 12750292 (-)
ccdc13 ccdc13 coding downstream 378799 12677824 ~ 12688016 (-)
LOC110508569 LOC106569331 coding downstream 400414 12638511 ~ 12666401 (-)
myl13 LOC100194663 coding downstream 551297 12510680 ~ 12515518 (-)
obscnb obscn coding upstream 22456 13104078 ~ 13208077 (-)
LOC110508585 LOC106599848 coding upstream 158940 13240562 ~ 13262111 (-)
LOC110508588 LOC106599832 coding upstream 205412 13287034 ~ 13481207 (-)
LOC110508590 LOC106599824 coding upstream 463668 13545290 ~ 13767407 (-)
sntg1 sntg1 coding upstream 829688 13911310 ~ 13969847 (-)
G2106296 NA non-coding downstream 210301 12856236 ~ 12856514 (-)
G2106284 NA non-coding downstream 216907 12849567 ~ 12849908 (-)
G2106279 NA non-coding downstream 221941 12844396 ~ 12844874 (-)
G2106277 NA non-coding downstream 223109 12843296 ~ 12843706 (-)
G2106225 NA non-coding downstream 258676 12807909 ~ 12808139 (-)
G2107190 NA non-coding upstream 59995 13141617 ~ 13141832 (-)
G2107197 NA non-coding upstream 81560 13163182 ~ 13163390 (-)
G2107198 NA non-coding upstream 82217 13163839 ~ 13164054 (-)
G2107202 NA non-coding upstream 93963 13175585 ~ 13175784 (-)
G2107283 NA non-coding upstream 271351 13352973 ~ 13420377 (-)
G2105419 LOC104953893 other downstream 1566743 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 2172735 10886198 ~ 10894141 (-)
G2103920 NA other downstream 2358316 10708012 ~ 10708499 (-)
G2103257 NA other downstream 2860139 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 2951418 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 2458146 15539768 ~ 15554897 (-)
G2109705 NA other upstream 2522063 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 2621714 15703333 ~ 15793545 (-)
G2110939 NA other upstream 3717768 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 4174586 17254319 ~ 17260420 (-)

Expression


Co-expression Network