ub2v2 (ube2v2)


Basic Information

Item Value
gene id ub2v2
gene name ube2v2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14106590 ~ 14122847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588584.2
GAACGGGGAAGAGATCTGGCTTTACCAGTTTGAGGTACTGTCTGTTCATAGCATTCTCAAGCTTAGTTCGTATGCAGTTGGTGTAATGTGCCTCTCCTGATTGTCCCAATGCAAGACCACCTTGTCAGCCACATTCTTGGTATGCCTTTTGGCTTTAATTGAATCTTGTCCAACCCCCCCAATTTAACCCCCTACTTAGTAGTATATTCGAATACATGGAAAGACCCAGCGGGGCCTGAGCCGTTTCTGCATACAAGCCTGAGGCCCAACACACCCTTATTTCATAGACTGCGGTCAGATAATCGTGATGTCACTGCTTCTGGATTTGGCTGAAGAAGATGGCGGCCTCCTCAGGAGTTAAAGTTCCACGTAATTTTCGCTTGTTGGAAGAGCTTGAAGAGGGTCAGAAAGGTGTTGGAGATGGGACAGTCAGCTGGGGCCTTGAAGACGATGAAGATATAATGCTAACACGGTGGACGGGCATGATCATCGGACCGGCACGAACTAATTATGAGAACAGGATATACAGTCTGAAAGTGGAATGTGGTCCAAAATATCCTGAATCACCACCGGTCGTTAGATTTGTAACAAAAATTTGCATGAATGGGATAAATAATTCCAATGGGATGgtgGATACACGAAGCATACCAATTCTATCTAAATGGCAAAATTCTTATAGCATTAAAGTTGTTCTTCAAGAGTTAAGGCGTCTAATGATGTCCAAGGAGAATATGAAGCTCCCACAACCACCAGAAGGACAAACCTACAGCAATTAATTGTTCACGGATTGTTTACTTTTGACCCCTATTGTCTTAAACCTTATTCTCTTATAAGAAATATTCCCTCCACCATTCCAAGAATTTAGACAGAGCCCGGTTGAATATTCCTAAAATTGGACATTCCTTCTAGATAGCTCATTCTAGAATGTCCCCACTGAGAGTGAAATGATGTTAAGAACACAGTTATTCCTCTTCTATTGACCTTAGTGTGACCATTCACTTTCTGATCAAGagatgtgtcaagttggcttCCCAAGAGAAGCATAAGCACCAAGTGGATACCCAAGTCAGAACAATTTCTTTCGAATGGCAGGTCACTGAAATAAAGAATTGAGGTGTGTGTATGATGGCATGCTCCAACTAAGAAATAGACAAAAATACACCAGTTGTAATTTGTTGGTACATTGAATTATTCTGAAGATTAAAATGTGGCTGTAGGCCAGACGTAGTGTCACCGGGTGTGAAGGatttgttatatattttttatttgacacaATGCCAATGTTTCTGTTCTGCTGCTTTTTGACTTGTAACAGACCTTAAAGCCTGTTTGGTTCCGAAAAAAATACCCCTTGCATTTAACTTTTAGTGAAAATGACAAGTGTATGTATGACATTGTGATTTTTCTGACATTAAAATCAATATCTGAAAAATA
>NM_001165240.2
GGCTGAAGAAGATGGCGGCCTCCTCAGGAGTTAAAGTTCCACGTAATTTTCGCTTGTTGGAAGAGCTTGAAGAGGGTCAGAAAGGTGTTGGAGATGGGACAGTCAGCTGGGGCCTTGAAGACGATGAAGATATAATGCTAACACGGTGGACGGGCATGATCATCGGACCGGCACGAGTAAGTGTGACTGCAGCAGGAACTAATTATGAGAACAGGATATACAGTCTGAAAGTGGAATGTGGTCCAAAATATCCTGAATCACCACCGGTCGTTAGATTTGTAACAAAAATTTGCATGAATGGGATAAATAATTCCAATGGGATGgtgGATACACGAAGCATACCAATTCTATCTAAATGGCAAAATTCTTATAGCATTAAAGTTGTTCTTCAAGAGTTAAGGCGTCTAATGATGTCCAAGGAGAATATGAAGCTCCCACAACCACCAGAAGGACAAACCTACAGCAATTAATTGTTCACGGATTGTTTACTTTTGACCCCTATTGTCTTAAACCTTATTCTCTTATAAGAAATATTCCCTCCACCATTCCAAGAATTTAGACAGAGCCCGGTTGAATATTCCTAAAATTGGACATTCCTTCTAGATAGCTCATTCTAGAATGTCCCCACTGAGAGTGAAATGATGTTAAGAACACAGTTATTCCTCTTCTATTGACCTTAGTGTGACCATTCACTTTCTGATCAAGagatgtgtcaagttggcttCCCAAGAGAAGCATAAGCACCAAGTGGATACCCAAGTCAGAACAATTTCTTTCGAATGGCAGGTCACTGAAATAAAGAATTGAGGTGTGTGTATGATGGCATGCTCCAACTAAGAAATAGACAAAAATACACCAGTTGTAATTTGTTGGTACATTGAATTATTCTGAAGATTAAAATGTGGCTGTAGGCCAGACGTAGTGTCACCGGGTGTGAAGGatttgttatatattttttatttgacacaATGCCAATGTTTCTGTTCTGCTGCTTTTTGACTTGTAACAGACCTTAAAGCCTGTTTGGTTCCGAAAAAAATACCCCTTGCATTTAACTTTTAGTGAAAATGACAAGTGTATGTATGACATTGTGATTTTTCTGACATTAAAATCAATATCTG
>TU2410909
TCAGGAGTTAAAGTTCCACGTAATTTTCGCTTGTTGGAAGAGCTTGAAGAGGGTCAGAAAGGTGTTGGAGATGGGACAGTCAGCTGGGGCCTTGAAGACGATGAAGATATAATGCTAACACGGTGGACGGGCATGATCATCGGACCGGCACGAGTAAGTGTGACTGCAGCAGGAACTAATTATGAGAACAGGATATACAGTCTGAAAGTGGAATGTGGTCCAAAATATCCTGAATCACCACCGGTCGTTAGATTTGTAACAAAAATTTGCATGAATGGGATAAATAATTCCAATGGGATGgtgGATACACGAAGCATACCAATTCTATCTAAATGGCAAAATTCTTATAGCATTAAAGTTGTTCTTCAAGAGTTAAGGCGTCTAATGATGTCCAAGGAGAATATGAAGCTCCCACAACCACCAGAAGGACAAACCTACAGCAATTAATTGTTCACGGATTGTTTACTTTTGACCCCTATTGTCTTAAACCTTATTCTCTTATAAGAAATATTCCCTCCACCATTCCAAGAATTTAGACAGAGCCCGGTTGAATATTCCTAAAATTGGACATTCCTTCTAGATAGCTCATTCTAGAATGTCCCCACTGAGAGTGAAATGATGTTAAGAACACAGTTATTCCTCTTCTATTGACCTTAGTGTGACCATTCACTTTCTGATCAAGagatgtgtcaagttggcttCCCAAGAGAAGCATAAGCACCAAGTGGATACCCAAGTCAGAACAATTTCTTTCGAATGGCAGGTCACTGAAATAAAGAATTGAGGTGTGTGTATGATGGCATGCTCCAACTAAGAAATAGACAAAAATACACCAGTTGTAATTTGTTGGTACATTGAATTATTCTGAAGATTAAAATGTGGCTGTAGGCCAGACGTAGTGTCACCGGGTGTGAAGGatttgttatatattttttatttgacacaATGCCAATGTTTCTGTTCTGCTGCTTTTTGACTTGTAACAGACCTTAAAGCCTGTTTGGTTCCGAAAAAAATACCCCTTGCATTTAACTTTTAGTGAAAATGACAAGTGTATGTATGACATTGTGATTTTTCTGACATTAAAATCAATATCTGAA
>TU2410910
TCAGGAGTTAAAGTTCCACGTAATTTTCGCTTGTTGGAAGAGCTTGAAGAGGGTCAGAAAGGTGTTGGAGATGGGACAGTCAGCTGGGGCCTTGAAGACGATGAAGATATAATGCTAACACGGTGGACGGGCATGATCATCGGACCGGCACGAACTAATTATGAGAACAGGATATACAGTCTGAAAGTGGAATGTGGTCCAAAATATCCTGAATCACCACCGGTCGTTAGATTTGTAACAAAAATTTGCATGAATGGGATAAATAATTCCAATGGGATGgtgGATACACGAAGCATACCAATTCTATCTAAATGGCAAAATTCTTATAGCATTAAAGTTGTTCTTCAAGAGTTAAGGCGTCTAATGATGTCCAAGGAGAATATGAAGCTCCCACAACCACCAGAAGGACAAACCTACAGCAATTAATTGTTCACGGATTGTTTACTTTTGACCCCTATTGTCTTAAACCTTATTCTCTTATAAGAAATATTCCCTCCACCATTCCAAGAATTTAGACAGAGCCCGGTTGAATATTCCTAAAATTGGACATTCCTTCTAGATAGCTCATTCTAGAATGTCCCCACTGAGAGTGAAATGATGTTAAGAACACAGTTATTCCTCTTCTATTGACCTTAGTGTGACCATTCACTTTCTGATCAAGagatgtgtcaagttggcttCCCAAGAGAAGCATAAGCACCAAGTGGATACCCAAGTCAGAACAATTTCTTTCGAATGGCAGGTCACTGAAATAAAGAATTGAGGTGTGTGTATGATGGCATGCTCCAACTAAGAAATAGACAAAAATACACCAGTTGTAATTTGTTGGTACATTGAATTATTCTGAAGATTAAAATGTGGCTGTAGGCCAGACGTAGTGTCACCGGGTGTGAAGGatttgttatatattttttatttgacacaATGCCAATGTTTCTGTTCTGCTGCTTTTTGACTTGTAACAGACCTTAAAGCCTGTTTGGTTCCGAAAAAAATACCCCTTGCATTTAACTTTTAGTGAAAATGACAAGTGTATGTATGACATTGTGATTTTTCTGACATTAAAATCAATATCTGAA

Function

symbol description
ube2v2 Acts upstream of or within protein K63-linked ubiquitination. Predicted to be active in nucleus. Orthologous to human UBE2V2 (ubiquitin conjugating enzyme E2 V2).

NR:

description
ubiquitin-conjugating enzyme E2 variant 2 isoform X2

GO:

id name namespace
GO:0070534 protein K63-linked ubiquitination biological_process
GO:0016881 acid-amino acid ligase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588584.2 False 1434 mRNA 0.41 4 14106590 14122847
NM_001165240.2 False 1121 mRNA 0.39 4 14106597 14122520
TU2410909 False 1100 lncRNA 0.39 3 14106595 14112004
TU2410910 True 1079 lncRNA 0.38 3 14106595 14112004

Neighbor

gene id symbol gene type direction distance location
sntg1 sntg1 coding downstream 136743 13911310 ~ 13969847 (-)
LOC110508590 LOC106599824 coding downstream 339183 13545290 ~ 13767407 (-)
LOC110508588 LOC106599832 coding downstream 625383 13287034 ~ 13481207 (-)
LOC110508585 LOC106599848 coding downstream 844479 13240562 ~ 13262111 (-)
obscnb obscn coding downstream 898513 13104078 ~ 13208077 (-)
LOC110508600 mcm4 coding upstream 173 14123020 ~ 14138016 (-)
spidr spidr coding upstream 18277 14141124 ~ 14227742 (-)
mapre2 LOC106599798 coding upstream 111862 14234709 ~ 14252720 (-)
dtna LOC100195747 coding upstream 136660 14259507 ~ 14292549 (-)
LOC110508166 NA coding upstream 393958 14516805 ~ 14520970 (-)
G2107707 NA non-coding downstream 74871 14031506 ~ 14031719 (-)
G2107667 NA non-coding downstream 109690 13988110 ~ 13996900 (-)
G2107588 NA non-coding downstream 249763 13856520 ~ 13856827 (-)
G2107538 NA non-coding downstream 288645 13800265 ~ 13817945 (-)
G2108016 NA non-coding upstream 53295 14176142 ~ 14177301 (-)
G2108023 NA non-coding upstream 72436 14195283 ~ 14195572 (-)
G2108143 NA non-coding upstream 250556 14373403 ~ 14385685 (-)
G2108169 NA non-coding upstream 286891 14409738 ~ 14410075 (-)
G2108173 NA non-coding upstream 288319 14411166 ~ 14411482 (-)
G2105419 LOC104953893 other downstream 2606518 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 3212510 10886198 ~ 10894141 (-)
G2103920 NA other downstream 3398091 10708012 ~ 10708499 (-)
G2103257 NA other downstream 3899914 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 3991193 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 1416921 15539768 ~ 15554897 (-)
G2109705 NA other upstream 1480838 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 1580489 15703333 ~ 15793545 (-)
G2110939 NA other upstream 2676543 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 3133361 17254319 ~ 17260420 (-)

Expression


Co-expression Network