mapre2 (LOC106599798)


Basic Information

Item Value
gene id mapre2
gene name LOC106599798
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14234709 ~ 14252720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471334.2
ATCAGAGTCAGATTTGTGAAGAATAAGCAGACAGGAGAACGAGCCCGAGGTGCGGCACTTTATATCGCATCGTCCTTtcatagagagagaacaggtaatCTGTTCAATATTTTAGAGACCCAATGCCAGGGCCCACCCAAGCACTGTCCCCAAATGGAGAGAATAACAACGACATCATCCCAACGGATGGATCCAACTGCATTCCTTACAGAAAAAATACAGTGCGAGGAGAGCGCGCCTACAGTTGGGGAATGGCGGTCAATGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGACATCACTGCCTGGGTTAACGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTCTCCTCAGGAGCGGCCTACTGCCAGTTCATGGATTTGCTCTTCCCTGGCTGCGTCAGTCTTAAGAAGGTTAAGTTCCAAGCTAAATTTGAGCATGAGTACATTCACAACTTCAAGCTACTGCAGGCCTCCTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAAAAGCTGGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTCAAGAGGTTCTTTGACGCCAACTACGACGGTAAAGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAGAAGTCTCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCAACCAGGGCGAGCGCAACAACGCCGAAACAAAACCCTTGCAGCCCCCATCCGTCCTCCAGACCATCTTCAGCCAAAAGAATCCCAGTTGCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACATTGCTCAATGACCAGGTGAACACATTAAAACTTGcactggagggggtggagaaggagagggatttTTACTTTGGAAAGCTGCGGGAGGTGGAAGTGCTGGCACAGGAGCAAGGTCAGGAGAGCGCACAGTTCGTGGAGAGGCTAATGGAGATCCTGTACTCTGCAGACGAACAGGAAGGtgcaggagagggggaggacgtGGACCCAGGGGTCCATGAAGAAGAGGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCCCTCCGTGTCCCCACCACCATGCCCTTTTACTTTGTGAGAACTTTGTTACAGgccggtggttcctggtcccctggcTGATGCCGTCCCCCACGACACCCCTCCGCCTCCCTTGGACATCGAGGGGAGCCCTGCCTATGCCGTCAGATCAGTCCTGGACTCCCAACATCATGGGGGTTGGCTCCAGTGCCTGGTGGATTCGGAGGGGTACGGACCAAAGGAGTGGTGCTGGGTTCCAGTGGACGACCTAGATCCCAACCTCACCCAAGAATTCCACCTTCGCCGTCTGGACTGGCCCGCTCCTCGTGCTCTACGTCAGTGGTCTACTAACCATTGGTCCTGGCAACCAATCTTTACACACTCCTGCATCTCATCAGTCACACCTGAACTTCATTACTCCCTGATTACTTACCCTTTATATAGCACTCTTTTGTATCGATTATCAGCCAGTATTGGTTATCTTTCCTTGTCAGACGTTTCTCTTGTTTTGTATCATTGTATGTTCATTAATATTAAACTCACTAAgagca
>XM_021589238.2
ATCAGAGTCAGATTTGTGAAGAATAAGCAGACAGGAGAACGAGCCCGAGGTGCGGCACTTTATATCGCATCGTCCTTtcatagagagagaacaggtaatCTGTTCAATATTTTAGAGACCCAATGCCAGGGCCCACCCAAGCACTGTCCCCAAATGGAGAGAATAACAACGACATCATCCCAACGGATGGATCCAACTGCATTCCTTACAGAAAAAATACAGTGCGAGGAGAGCGCGCCTACAGTTGGGGAATGGCGGTCAATGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGACATCACTGCCTGGGTTAACGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTCTCCTCAGGAGCGGCCTACTGCCAGTTCATGGATTTGCTCTTCCCTGGCTGCGTCAGTCTTAAGAAGGTTAAGTTCCAAGCTAAATTTGAGCATGAGTACATTCACAACTTCAAGCTACTGCAGGCCTCCTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAAAAGCTGGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTCAAGAGGTTCTTTGACGCCAACTACGACGGTAAAGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAGAAGTCTCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCAACCAGGGCGAGCGCAACAACGCCGAAACAAAACCCTTGCAGCCCCCATCCGTCCTCCAGACCATCTTCAGCCAAAAGAATCCCAGTTGCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACATTGCTCAATGACCAGGTGAACACATTAAAACTTGcactggagggggtggagaaggagagggatttTTACTTTGGAAAGCTGCGGGAGGTGGAAGTGCTGGCACAGGAGCAAGGTCAGGAGAGCGCACAGTTCGTGGAGAGGCTAATGGAGATCCTGTACTCTGCAGACGAACAGGAAGGtgcaggagagggggaggacgtGGACCCAGGGGTCCATGAAGAAGAGGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCCCTCCGTGTCCCCACCACCATGCCCTTTTACTTTACTGAGCACATGAAGCAACCTCGTGAAAAGAAGCACGACcctcgttttttattttttagatatCCCTCAGACGTTCTGCGTTCTGTGTGTTTTGTTGACTGTCGGTGAAATGCTGTGGCCAGGTTGCTGTTATTACATACCGCCACATGCAGAAAAGCTCAGACCATCACAGAAGTTTCCAAGGCCATTGAAAAAGGGTGAAAAAAGTATGTAATTCAAAATTCTCTATTTGATGAAATTGTAATATGGAGTAGACCGTGTTTTTTATCTGACAGCACGTGTTAAGTATGTTGCCAGTCTCGGTCGGTCCCATGATCCATCCATTATGTACGTTGTTTCAAAGTTATTGTTTATTTTAAGACTTGTACATATTAATCATGAGAACGCAATAAGCTAAACCCTGAAGGGCCGGTAGTAGCTCCTATTTAACCTTCCTCCATATGTTGCACTGTAATTTGACTCTGGAATGGACAATCTGTCCATAGATTCTCACAATTCACACTTACAAATTGAATTGCAAAAATTATATTTATTAAAAACTAAGGAGACTTGATATTGCCTTTATGCGATGGGAGGCAGTTTAGTCCATGAGAATTATTAATGAAAAGTAGTAGTAAGTTAGACAAATTATGAGTAGCATGTGACTGTCTTCAGCAATTCAAAGAATTTAGATAATCAGTGCGTACTCAAAAATGCCTTATTTGGTGCTACAGTGACAGAAACAAGGTTGATTCATCAGTATGGCTTCATCATACGGGAAAGGGTTAGTGTAGACTAGAATGATCacagtaaacattttttttaaacttcaagAGCAACTAGCCACCATCGTATTCAATGGAAGTCGGGTatatttcagatgttttcatGACTTTTGAACCACAGGTCTTAGGGAAAGTTGTGAGTCAGTTCACTGAGTAATTTGACATACTATATTCCAAGTACGTATATTGTATACCCTTTCTTAATGTTGCATTTATTCTTATTGAACTCAGCAGTGCACCATAATACTTTAGTCGTATGTTGTGTAAATGAAAAGGAATGTAAACATGTATTGTCAATAATTATAAATAGATCATGTTTTTCTTCTGATGTCCCACTCATTATGCATTCCCCAAAATGTGTTGCATGTTTGCATTTTATTTGTGAATAACTTGACCTGCTTTTTACATATTTAATAAAAAACAACTATGTTAAGTGAGCTGTGTTTTGTATGTTTAACTTGCTATTTCAAACTGTTGAGATTTGGATGGATTTGCTGTAATAAAACCTTTCACCTTTTCAGTCAAA
>XM_021589237.2
CACCTACGTCATCAGAGTCAGATTTGTGAAGAATAAGCAGACAGGAGAACGAGCCCGAGGTGCGGCACTTTATATCGCATCGTCCTTtcatagagagagaacaggtaatCTGTTCAATATTTTAGAGACCCAATGCCAGGGCCCACCCAAGCACTGTCCCCAAATGGAGAGAATAACAACGACATCATCCCAACGGATGGATCCAACTGCATTCCTTACAGAAAAAATACAGTGCGAGGAGAGCGCGCCTACAGTTGGGGAATGGCGGTCAATGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGACATCACTGCCTGGGTTAACGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTCTCCTCAGGAGCGGCCTACTGCCAGTTCATGGATTTGCTCTTCCCTGGCTGCGTCAGTCTTAAGAAGGTTAAGTTCCAAGCTAAATTTGAGCATGAGTACATTCACAACTTCAAGCTACTGCAGGCCTCCTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAAAAGCTGGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTCAAGAGGTTCTTTGACGCCAACTACGACGGTAAAGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAGAAGTCTCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCAACCAGGGCGAGCGCAACAACGCCGAAACAAAACCCTTGCAGCCCCCATCCGTCCTCCAGACCATCTTCAGCCAAAAGAATCCCAGTTGCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACATTGCTCAATGACCAGGTGAACACATTAAAACTTGcactggagggggtggagaaggagagggatttTTACTTTGGAAAGCTGCGGGAGGTGGAAGTGCTGGCACAGGAGCAAGGTCAGGAGAGCGCACAGTTCGTGGAGAGGCTAATGGAGATCCTGTACTCTGCAGACGAACAGGAAGGtgcaggagagggggaggacgtGGACCCAGGGGTCCATGAAGAAGAGGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCCCTCCGTGTCCCCACCACCATGCCCTTTTACTTTGTGAGAACTTTGTTACAGGTatcatttttttgtttctttttattacatttttttttctcctaaTGGTTTGTTTCTTTTTCGTTCTCTTGAAGACTGAGCACATGAAGCAACCTCGTGAAAAGAAGCACGACcctcgttttttattttttagatatCCCTCAGACGTTCTGCGTTCTGTGTGTTTTGTTGACTGTCGGTGAAATGCTGTGGCCAGGTTGCTGTTATTACATACCGCCACATGCAGAAAAGCTCAGACCATCACAGAAGTTTCCAAGGCCATTGAAAAAGGGTGAAAAAAGTATGTAATTCAAAATTCTCTATTTGATGAAATTGTAATATGGAGTAGACCGTGTTTTTTATCTGACAGCACGTGTTAAGTATGTTGCCAGTCTCGGTCGGTCCCATGATCCATCCATTATGTACGTTGTTTCAAAGTTATTGTTTATTTTAAGACTTGTACATATTAATCATGAGAACGCAATAAGCTAAACCCTGAAGGGCCGGTAGTAGCTCCTATTTAACCTTCCTCCATATGTTGCACTGTAATTTGACTCTGGAATGGACAATCTGTCCATAGATTCTCACAATTCACACTTACAAATTGAATTGCAAAAATTATATTTATTAAAAACTAAGGAGACTTGATATTGCCTTTATGCGATGGGAGGCAGTTTAGTCCATGAGAATTATTAATGAAAAGTAGTAGTAAGTTAGACAAATTATGAGTAGCATGTGACTGTCTTCAGCAATTCAAAGAATTTAGATAATCAGTGCGTACTCAAAAATGCCTTATTTGGTGCTACAGTGACAGAAACAAGGTTGATTCATCAGTATGGCTTCATCATACGGGAAAGGGTTAGTGTAGACTAGAATGATCacagtaaacattttttttaaacttcaagAGCAACTAGCCACCATCGTATTCAATGGAAGTCGGGTatatttcagatgttttcatGACTTTTGAACCACAGGTCTTAGGGAAAGTTGTGAGTCAGTTCACTGAGTAATTTGACATACTATATTCCAAGTACGTATATTGTATACCCTTTCTTAATGTTGCATTTATTCTTATTGAACTCAGCAGTGCACCATAATACTTTAGTCGTATGTTGTGTAAATGAAAAGGAATGTAAACATGTATTGTCAATAATTATAAATAGATCATGTTTTTCTTCTGATGTCCCACTCATTATGCATTCCCCAAAATGTGTTGCATGTTTGCATTTTATTTGTGAATAACTTGACCTGCTTTTTACATATTTAATAAAAAACAACTATGTTAAGTGAGCTGTGTTTTGTATGTTTAACTTGCTATTTCAAACTGTTGAGATTTGGATGGATTTGCTGTAATAAAACCTTTCACCTTTTCAGTCAAA
>XM_021589239.2
GGAAAATCGTTTTAAaaacggtcatccaacttggaattccaagtcggaaaaTCTAGCATATTTTTTTTCTAGCGCTCCAACTTTATGGCCTGAAGATAACTGACATCATGATTTTACCTAATTTTTTCCCGACTTCCGATCAACTTTCACCAGTTGCAAAACACTCCTACACGGGAAACCGGGCCGGATTAATCAAGTCCCTTCATTGAATGGATAGAGCCGTTTTTTTTAAGACGAAGTAACCTGGGACCTGAGTTCACTGTTGGGGAATGGCGGTCAATGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGACATCACTGCCTGGGTTAACGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTCTCCTCAGGAGCGGCCTACTGCCAGTTCATGGATTTGCTCTTCCCTGGCTGCGTCAGTCTTAAGAAGGTTAAGTTCCAAGCTAAATTTGAGCATGAGTACATTCACAACTTCAAGCTACTGCAGGCCTCCTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAAAAGCTGGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTCAAGAGGTTCTTTGACGCCAACTACGACGGTAAAGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAGAAGTCTCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCAACCAGGGCGAGCGCAACAACGCCGAAACAAAACCCTTGCAGCCCCCATCCGTCCTCCAGACCATCTTCAGCCAAAAGAATCCCAGTTGCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACATTGCTCAATGACCAGGTGAACACATTAAAACTTGcactggagggggtggagaaggagagggatttTTACTTTGGAAAGCTGCGGGAGGTGGAAGTGCTGGCACAGGAGCAAGGTCAGGAGAGCGCACAGTTCGTGGAGAGGCTAATGGAGATCCTGTACTCTGCAGACGAACAGGAAGGtgcaggagagggggaggacgtGGACCCAGGGGTCCATGAAGAAGAGGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCCCTCCGTGTCCCCACCACCATGCCCTTTTACTTTGTGAGAACTTTGTTACAGGTatcatttttttgtttctttttattacatttttttttctcctaaTGGTTTGTTTCTTTTTCGTTCTCTTGAAGACTGAGCACATGAAGCAACCTCGTGAAAAGAAGCACGACcctcgttttttattttttagatatCCCTCAGACGTTCTGCGTTCTGTGTGTTTTGTTGACTGTCGGTGAAATGCTGTGGCCAGGTTGCTGTTATTACATACCGCCACATGCAGAAAAGCTCAGACCATCACAGAAGTTTCCAAGGCCATTGAAAAAGGGTGAAAAAAGTATGTAATTCAAAATTCTCTATTTGATGAAATTGTAATATGGAGTAGACCGTGTTTTTTATCTGACAGCACGTGTTAAGTATGTTGCCAGTCTCGGTCGGTCCCATGATCCATCCATTATGTACGTTGTTTCAAAGTTATTGTTTATTTTAAGACTTGTACATATTAATCATGAGAACGCAATAAGCTAAACCCTGAAGGGCCGGTAGTAGCTCCTATTTAACCTTCCTCCATATGTTGCACTGTAATTTGACTCTGGAATGGACAATCTGTCCATAGATTCTCACAATTCACACTTACAAATTGAATTGCAAAAATTATATTTATTAAAAACTAAGGAGACTTGATATTGCCTTTATGCGATGGGAGGCAGTTTAGTCCATGAGAATTATTAATGAAAAGTAGTAGTAAGTTAGACAAATTATGAGTAGCATGTGACTGTCTTCAGCAATTCAAAGAATTTAGATAATCAGTGCGTACTCAAAAATGCCTTATTTGGTGCTACAGTGACAGAAACAAGGTTGATTCATCAGTATGGCTTCATCATACGGGAAAGGGTTAGTGTAGACTAGAATGATCacagtaaacattttttttaaacttcaagAGCAACTAGCCACCATCGTATTCAATGGAAGTCGGGTatatttcagatgttttcatGACTTTTGAACCACAGGTCTTAGGGAAAGTTGTGAGTCAGTTCACTGAGTAATTTGACATACTATATTCCAAGTACGTATATTGTATACCCTTTCTTAATGTTGCATTTATTCTTATTGAACTCAGCAGTGCACCATAATACTTTAGTCGTATGTTGTGTAAATGAAAAGGAATGTAAACATGTATTGTCAATAATTATAAATAGATCATGTTTTTCTTCTGATGTCCCACTCATTATGCATTCCCCAAAATGTGTTGCATGTTTGCATTTTATTTGTGAATAACTTGACCTGCTTTTTACATATTTAATAAAAAACAACTATGTTAAGTGAGCTGTGTTTTGTATGTTTAACTTGCTATTTCAAACTGTTGAGATTTGGATGGATTTGCTGTAATAAAACCTTTCACCTTTTCAGTCAAA

Function

NR:

description
PREDICTED: microtubule-associated protein RP/EB family member 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471334.2 False 1672 mRNA 0.51 8 14234709 14243467
XM_021589238.2 False 2468 mRNA 0.43 8 14237078 14243467
XM_021589237.2 False 2570 mRNA 0.42 7 14237078 14243477
XM_021589239.2 True 2578 mRNA 0.42 7 14237078 14252720

Neighbor

gene id symbol gene type direction distance location
spidr spidr coding downstream 6967 14141124 ~ 14227742 (-)
LOC110508600 mcm4 coding downstream 96693 14123020 ~ 14138016 (-)
ub2v2 ube2v2 coding downstream 111862 14106590 ~ 14122847 (-)
sntg1 sntg1 coding downstream 264862 13911310 ~ 13969847 (-)
LOC110508590 LOC106599824 coding downstream 467302 13545290 ~ 13767407 (-)
dtna LOC100195747 coding upstream 6787 14259507 ~ 14292549 (-)
LOC110508166 NA coding upstream 264085 14516805 ~ 14520970 (-)
LOC110508608 LOC106599765 coding upstream 363197 14615917 ~ 14625901 (-)
LOC110508612 LOC106599764 coding upstream 376815 14629535 ~ 14652591 (-)
LOC110508613 NA coding upstream 508757 14761477 ~ 14762622 (-)
G2108023 NA non-coding downstream 39137 14195283 ~ 14195572 (-)
G2108016 NA non-coding downstream 57408 14176142 ~ 14177301 (-)
G2107976 NA non-coding downstream 117543 14065024 ~ 14117166 (-)
G2107707 NA non-coding downstream 202990 14031506 ~ 14031719 (-)
G2108143 NA non-coding upstream 120683 14373403 ~ 14385685 (-)
G2108169 NA non-coding upstream 157018 14409738 ~ 14410075 (-)
G2108173 NA non-coding upstream 158446 14411166 ~ 14411482 (-)
G2108229 NA non-coding upstream 160386 14413106 ~ 14413323 (-)
G2108233 NA non-coding upstream 167672 14420392 ~ 14420615 (-)
G2105419 LOC104953893 other downstream 2734637 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 3340629 10886198 ~ 10894141 (-)
G2103920 NA other downstream 3526210 10708012 ~ 10708499 (-)
G2103257 NA other downstream 4028033 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 4119312 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 1287048 15539768 ~ 15554897 (-)
G2109705 NA other upstream 1350965 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 1450616 15703333 ~ 15793545 (-)
G2110939 NA other upstream 2546670 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 3003488 17254319 ~ 17260420 (-)

Expression


Co-expression Network