LOC110508166


Basic Information

Item Value
gene id LOC110508166
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14516805 ~ 14520970 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508166
ATGACTCGGGTCAATTTCAAAACTTGTTTATGGGTTTCTCCGTGCAAGTTTTTCACTTACTTCAAGGGTGTTGCGGTGACTGATACCTGCCTGGTGAACGTTTATCCCATTGGTGAAGATTACTATGTCATCACAGAAACCAATTACATCACTAAAGTCAACACTGACACACTGGAGACACTGAAGAAGATCAAAATTGAGAACTGCGTCAACATCAATGGAGTGACAGCCCACTTGCACGGAACAGTGTTCAACATTGGAGACTGCATGGGAAAAGGAGCGTCACTGACCTACAATGTTATCAGACCTACAATGCAAGCTGAAGACCCCATTGAAAAGTCCATGGCTGTGGTGCAATTCCCCAGTGCCAAGAGGTTCACGCCCTCCTATGTGCATAGTTTTGGCATGTCGTAGAACTACATTGTCTTCGTGGAGACCCCGGTGAAAATCAACCTTAAGTTCCTGAGTGCCTGGAGCATCCGAGGCTCCAACTACATGTATTGCTTTGAGTCCAATTAGGTTTTTGGTACGTTGTTCCACATCGCCAGAAAGGACAttggaggaggacaaggagagtatGTTGACCATAAGTTCAGGGCTGCTCCTATCAACCTGTTTCATCACATCAACACTTACGAGGAACAAGGCTTCATCGTGGCTGAAGTGTATACATGGAAAGGatgggagaTTGTTTACAACTACCTTTGGCTGGCCAACCTGCGTTCCAACTGGGAGGAGGTGAAGAATGCAGCCATGATGACTCCTCAGCCAGAGGTCAAGAGATACGTCATCCCAGTGGACATCCACAGGGAGGAGCAGGGACAGAACCTGATACACCACGGCAACATCGGTGATGTGTTCTGACGGGACCATCTGGCTGGAGCCTGAAGCGCTGTTCTCTGGGCCTCACCAAGCCTTTGAGTTCCCTCAAATCAACTATTAGAAGCACGGTGAGAAGAACTACACATATGCCTACGCCTCAACCACTTCAGGGTTGAGTCTCTCTGTCCACTTGCGGCTGTAGATTATCAAGTTGAACGTGAAGACCAAGGAGACCTAGGTGTGGCAGGAGCCAGACTCCTACCCCTCAGAGTCCATTTATGCAAACCCCTGATGGagtggatgatgatgatgGTGTCCAGTTGACCATTGTGGTGGCCACCGGGGCCCAGAGGCCAGGGTacatgctgatcctcaacgccAAGGACATGTCGGAGATCGCCAGGGCAGAGGTGAAGTGCTCTATGCCGGTCACCTTCCACGGAATGTACAAGCCATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508166 True 1280 mRNA 0.49 11 14516805 14520970

Neighbor

gene id symbol gene type direction distance location
dtna LOC100195747 coding downstream 224256 14259507 ~ 14292549 (-)
mapre2 LOC106599798 coding downstream 264085 14234709 ~ 14252720 (-)
spidr spidr coding downstream 289063 14141124 ~ 14227742 (-)
LOC110508600 mcm4 coding downstream 378789 14123020 ~ 14138016 (-)
ub2v2 ube2v2 coding downstream 393958 14106590 ~ 14122847 (-)
LOC110508608 LOC106599765 coding upstream 94947 14615917 ~ 14625901 (-)
LOC110508612 LOC106599764 coding upstream 108565 14629535 ~ 14652591 (-)
LOC110508613 NA coding upstream 240507 14761477 ~ 14762622 (-)
LOC110508618 LOC106599747 coding upstream 430743 14951713 ~ 14971756 (-)
LOC110508622 LOC106599742 coding upstream 792733 15313703 ~ 15315936 (-)
G2108302 NA non-coding downstream 1131 14509768 ~ 14515674 (-)
G2108298 NA non-coding downstream 11595 14504905 ~ 14505210 (-)
G2108294 NA non-coding downstream 20276 14495288 ~ 14496529 (-)
G2108233 NA non-coding downstream 96190 14420392 ~ 14420615 (-)
G2108229 NA non-coding downstream 103482 14413106 ~ 14413323 (-)
G2108319 NA non-coding upstream 4488 14525458 ~ 14525717 (-)
G2108545 NA non-coding upstream 87523 14608493 ~ 14611820 (-)
G2108574 NA non-coding upstream 158943 14679913 ~ 14680244 (-)
G2108577 NA non-coding upstream 163176 14684146 ~ 14696693 (-)
G2108693 NA non-coding upstream 329030 14850000 ~ 14850206 (-)
G2105419 LOC104953893 other downstream 3016733 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 3622725 10886198 ~ 10894141 (-)
G2103920 NA other downstream 3808306 10708012 ~ 10708499 (-)
G2103257 NA other downstream 4310129 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 4401408 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 1018798 15539768 ~ 15554897 (-)
G2109705 NA other upstream 1082715 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 1182366 15703333 ~ 15793545 (-)
G2110939 NA other upstream 2278420 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 2735238 17254319 ~ 17260420 (-)

Expression


Co-expression Network