LOC110508612 (LOC106599764)


Basic Information

Item Value
gene id LOC110508612
gene name LOC106599764
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14629535 ~ 14652591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589264.2
taggtggcggcatgcacaacGAAATGTGCGAACGGAATGATAGCAAAGAAGAACATCAAGGAAGCTGCTAGTGTGGGCGGCTCTATCAGATGTTCAACATCAAAACAACATTATTAGCGCGTCAGATGCATTTACGACTGCACTGACATTTAAACAATTTTGGTTAGATGTATACTGTATTGGAAGTGCTACTAAAAGTAACCTGATGTATAGCTTATACTGTTTACCGTCTTTCGCTCAATAGCTATCTCAAAATCGCCATTTTACCTTCTGGTTGTGCCTTGGGCGGTGGGTTGAGCGGCCAGTGTCAAAATAGTTGCTAGCTGGGTTGCTCACTATTTTAGACGTTAACCCAGTACAACGAGCTTTTAAAATATCATGCTAGCTGTCTAACAAGCTTGGCTACATGCTTGGTAGCTCATGGTAGTAGTTTCAAATTACGACGTTAGCCAGGTAGCTAGTTAGCCAAGCGACTATCTAGTTGGCTAACAACAAGCCTTATCAGATAATCAACTGTAGCTTGTGGTACTGGCTAGCTACCTAGAGGACTTTATACAATAACCAAACTGGATAAAACGTTGGATTTGGTCGGTTTTAAGTCGGGCTCAGCGGGTTCGCTGACCCCAcagaagaggatgaagaagaggaaggaaCTCGATGCATTAATCGGACTTGGGGACAGTAAAAGGAAGAAAACCAAAAAGGGGTCCGGGCACAGGCTCCTCAGAACCGAGCCTCCACTAGACTCAGAATCCGAATCAAGTTCAGATGATGATGAATTCAGCAACTTTGCTACTGTCGCTGCTTTTGGAAAAAGAAGTTACGTGAAGTGCTGCAATGTCTGCTATCCCTTGTTCCTGTTCATCATACTGGCTGCCTGTGTTACGGCTTGTGCCGGACTGATATGGATGCAGATTGCCCTGAAAGAAGATCTAGACTCCCTCAAAGAAAAGCTGCATACAATGGAATCCGGCCAGAAGGTTTCGTCACATGAAATACCAAAACTAAGTGAAGATCTGAAGACAAAGCAGAGAAAACTGGAGGACATTGAAAATGGAGACAAGGGTCTGAACAAACTGTGGTCCAACCTTACAGAGATTAACAGAAAGATCAGTTTTCTGGACACTGCGGTGAACCATCTAAAGGCCAACATCAAATCAGCCTCAGACTTAATCAACCTTCCGACTACAGTTGAAGAGCTCCAAAAGAGTGTGGCTTCAATCGGCAGCACTTTAACCAGTGTGCAGCATGATGTCAAGACAATACAGACGGCCCTTGAGGACCAGAAGAAAGAAACAGACGACCTCAAGAGGACCATGGATGCCGAGGCTAAAGAATCAAATGTGAAATCGACAGCCTCAGTTGAAAAAGAAACAAGCAACCGCTCATCAACATTAGCTCAAAACCAGGATGTAACTCACCTGAGAGAGGTTGTGAGCGAAGTTAACAAGACCCAAGGGCTGTACCACTCCTGGACTGGTGACCAAATCCAGAATCTCCAAACCGCTGTGTCCAACCTCACTCACAGGGTGTCTTCCATGGAGCAGGGCTCTCCTCAGACAACACCACACAGTGACCTTGTGGAGGTAGTTGAACAATTGCCTGTCAGTGGAGATGCAACAGAACCAGTGAAGGACCTGGCCACAGAGATGGACACCAATGCAGATGGACTTAAAGCAGCAACTTCAGAAGCTACACATGAAAAATCCACAGGTTCAAAGCCAACGAGGCGTCCATGGTTTTTGACTCCAAACCGCACCaagagagagtctggaacagAAAGCCCAAAGACTGTGTCATTCCCTGGAGTCAGCTCTCTGAAAGATCTCAAAGAGCTCTTTGAGCGCTCGGGTACCGACCCCACCACTCAGGGGATGTCTTACCAAGTCCTGAAGAAATTATTTGACACAGCAACGCCAGATCCCCAAAGCCTGGAACGCTACGACAAAGACGGGGACCAGAGGTTCTCACTGGCTGAAATGAAAGCTGCTGCAGGTCTGTGAGAAGAGGAGTGGCAGAGGCAACAGTGGAAGGAGAAGTGGTCTCTGGTGTGTGTGGAGTGCCTCACAGTGAAGATAGTTGCACTTTTATTGAACTGAGTATTTAATAACAAACTGAATGTTGAACGGTAGCACTggctagcccccccccccttccacacCTTACTGGTCCTACACGCCTAAGCTAGAGTAAGCAACTCAGATCCAAGCTTTGATATTTCTATATTATTTTCCAAAACAGTTTACAAAATGGTACTGTTcagaaatatttgttttattcatttatGACCAGTTGATGTCAAATGAATTGTTGAGAAGGGTCAAAATATCACCTATTATAATGTAGttcctaccacacacacactcccattttAGATAAGTTCAGATCGTCTTTGCTCATTTTCTGTCTTCTTTATACATGTTTTGTTGTAAGTCTCGAGTTATTTTCTGCATTCTTATTTGGATTTTAATGTAACACAGAGACTGTAGACATATCCTTAACCCAACCATAGTTTATTTTTAAGTTGTTTTTAAGTCTGCAATATTTGAAGGGCTATAAACACACACTTTTAACTAGTTCAGAATGAATCATGTTGAAATATTAACTCCTGAAGCATATGTAGCAATAATACAATGTAAATGAGCTTATACTAACAGACTATAGTGATCACTTCAATttgcagtatatatacagtaccagtcaaaagtttggacacctactcattcaagggtttttctttatttttactattttatacattgtagagtcATAGTGAAGACACAAACTatgaaacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaatatattttagattcttcaaagtagcaaccttTTGCCTTCGACAGCTTTGCCTTCTCTCcaaccagcttaacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgaacacttgttgactgcttttccttcactctgcgtcccaactcatcccaacccatctcaattgggttgagg
>XM_021589265.2
acagtaggtggcggcatgcacaacGAAATGTGCGAACGGAATGATAGCAAAGAAGAACATCAAGGAAGCTGCTAGTGTGGGCGGCTCTATCAGATGTTCAACATCAAAACAACATTATTAGCGCGTCAGATGCATTTACGACTGCACTGACATTTAAACAATTTTGGTTAGATGTATACTGTATTGGAAGTGCTACTAAAAGTAACCTGATGTATAGCTTATACTGTTTACCGTCTTTCGCTCAATAGCTATCTCAAAATCGCCATTTTACCTTCTGGTTGTGCCTTGGGCGGTGGGTTGAGCGGCCAGTGTCAAAATAGTTGCTAGCTGGGTTGCTCACTATTTTAGACGTTAACCCAGTACAACGAGCTTTTAAAATATCATGCTAGCTGTCTAACAAGCTTGGCTACATGCTTGGTAGCTCATGGTAGTAGTTTCAAATTACGACGTTAGCCAGGTAGCTAGTTAGCCAAGCGACTATCTAGTTGGCTAACAACAAGCCTTATCAGATAATCAACTGTAGCTTGTGGTACTGGCTAGCTACCTAGAGGACTTTATACAATAACCAAACTGGATAAAACGTTGGATTTGGTCGGTTTTAAGTCGGGCTCAGCGGGTTCGCTGACCCCAcagaagaggatgaagaagaggaaggaaCTCGATGCATTAATCGGACTTGGGGACAGTAAAAGGAAGAAAACCAAAAAGGGGTCCGGGCACAGGCTCCTCAGAACCGAGCCTCCACTAGACTCAGAATCCGAATCAAGTTCAGATGATGATGAATTCAGCAACTTTGCTACTGTCGCTGCTTTTGGAAAAAGTTACGTGAAGTGCTGCAATGTCTGCTATCCCTTGTTCCTGTTCATCATACTGGCTGCCTGTGTTACGGCTTGTGCCGGACTGATATGGATGCAGATTGCCCTGAAAGAAGATCTAGACTCCCTCAAAGAAAAGCTGCATACAATGGAATCCGGCCAGAAGGTTTCGTCACATGAAATACCAAAACTAAGTGAAGATCTGAAGACAAAGCAGAGAAAACTGGAGGACATTGAAAATGGAGACAAGGGTCTGAACAAACTGTGGTCCAACCTTACAGAGATTAACAGAAAGATCAGTTTTCTGGACACTGCGGTGAACCATCTAAAGGCCAACATCAAATCAGCCTCAGACTTAATCAACCTTCCGACTACAGTTGAAGAGCTCCAAAAGAGTGTGGCTTCAATCGGCAGCACTTTAACCAGTGTGCAGCATGATGTCAAGACAATACAGACGGCCCTTGAGGACCAGAAGAAAGAAACAGACGACCTCAAGAGGACCATGGATGCCGAGGCTAAAGAATCAAATGTGAAATCGACAGCCTCAGTTGAAAAAGAAACAAGCAACCGCTCATCAACATTAGCTCAAAACCAGGATGTAACTCACCTGAGAGAGGTTGTGAGCGAAGTTAACAAGACCCAAGGGCTGTACCACTCCTGGACTGGTGACCAAATCCAGAATCTCCAAACCGCTGTGTCCAACCTCACTCACAGGGTGTCTTCCATGGAGCAGGGCTCTCCTCAGACAACACCACACAGTGACCTTGTGGAGGTAGTTGAACAATTGCCTGTCAGTGGAGATGCAACAGAACCAGTGAAGGACCTGGCCACAGAGATGGACACCAATGCAGATGGACTTAAAGCAGCAACTTCAGAAGCTACACATGAAAAATCCACAGGTTCAAAGCCAACGAGGCGTCCATGGTTTTTGACTCCAAACCGCACCaagagagagtctggaacagAAAGCCCAAAGACTGTGTCATTCCCTGGAGTCAGCTCTCTGAAAGATCTCAAAGAGCTCTTTGAGCGCTCGGGTACCGACCCCACCACTCAGGGGATGTCTTACCAAGTCCTGAAGAAATTATTTGACACAGCAACGCCAGATCCCCAAAGCCTGGAACGCTACGACAAAGACGGGGACCAGAGGTTCTCACTGGCTGAAATGAAAGCTGCTGCAGGTCTGTGAGAAGAGGAGTGGCAGAGGCAACAGTGGAAGGAGAAGTGGTCTCTGGTGTGTGTGGAGTGCCTCACAGTGAAGATAGTTGCACTTTTATTGAACTGAGTATTTAATAACAAACTGAATGTTGAACGGTAGCACTggctagcccccccccccttccacacCTTACTGGTCCTACACGCCTAAGCTAGAGTAAGCAACTCAGATCCAAGCTTTGATATTTCTATATTATTTTCCAAAACAGTTTACAAAATGGTACTGTTcagaaatatttgttttattcatttatGACCAGTTGATGTCAAATGAATTGTTGAGAAGGGTCAAAATATCACCTATTATAATGTAGttcctaccacacacacactcccattttAGATAAGTTCAGATCGTCTTTGCTCATTTTCTGTCTTCTTTATACATGTTTTGTTGTAAGTCTCGAGTTATTTTCTGCATTCTTATTTGGATTTTAATGTAACACAGAGACTGTAGACATATCCTTAACCCAACCATAGTTTATTTTTAAGTTGTTTTTAAGTCTGCAATATTTGAAGGGCTATAAACACACACTTTTAACTAGTTCAGAATGAATCATGTTGAAATATTAACTCCTGAAGCATATGTAGCAATAATACAATGTAAATGAGCTTATACTAACAGACTATAGTGATCACTTCAATttgcagtatatatacagtaccagtcaaaagtttggacacctactcattcaagggtttttctttatttttactattttatacattgtagagtcATAGTGAAGACACAAACTatgaaacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaatatattttagattcttcaaagtagcaaccttTTGCCTTCGACAGCTTTGCCTTCTCTCcaaccagcttaacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgaacacttgttgactgcttttccttcactctgcgtcccaactcatcccaacccatctcaattgggttgagg

Function

NR:

description
EF-hand calcium-binding domain-containing protein 14-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589264.2 False 3022 mRNA 0.43 10 14629535 14652587
XM_021589265.2 True 3023 mRNA 0.43 10 14629535 14652591

Neighbor

gene id symbol gene type direction distance location
LOC110508608 LOC106599765 coding downstream 3634 14615917 ~ 14625901 (-)
LOC110508166 NA coding downstream 108565 14516805 ~ 14520970 (-)
dtna LOC100195747 coding downstream 336986 14259507 ~ 14292549 (-)
mapre2 LOC106599798 coding downstream 376815 14234709 ~ 14252720 (-)
spidr spidr coding downstream 401793 14141124 ~ 14227742 (-)
LOC110508613 NA coding upstream 108886 14761477 ~ 14762622 (-)
LOC110508618 LOC106599747 coding upstream 299122 14951713 ~ 14971756 (-)
LOC110508622 LOC106599742 coding upstream 661112 15313703 ~ 15315936 (-)
LOC110508623 LOC106599911 coding upstream 679676 15332267 ~ 15335367 (-)
LOC110508624 LOC106599739 coding upstream 686694 15339285 ~ 15341799 (-)
G2108545 NA non-coding downstream 17715 14608493 ~ 14611820 (-)
G2108319 NA non-coding downstream 103818 14525458 ~ 14525717 (-)
G2108302 NA non-coding downstream 113861 14509768 ~ 14515674 (-)
G2108298 NA non-coding downstream 124325 14504905 ~ 14505210 (-)
G2108294 NA non-coding downstream 133006 14495288 ~ 14496529 (-)
G2108574 NA non-coding upstream 27322 14679913 ~ 14680244 (-)
G2108577 NA non-coding upstream 31555 14684146 ~ 14696693 (-)
G2108693 NA non-coding upstream 197409 14850000 ~ 14850206 (-)
G2108694 NA non-coding upstream 198042 14850633 ~ 14850869 (-)
G2108696 NA non-coding upstream 199721 14852312 ~ 14852556 (-)
G2105419 LOC104953893 other downstream 3129463 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 3735455 10886198 ~ 10894141 (-)
G2103920 NA other downstream 3921036 10708012 ~ 10708499 (-)
G2103257 NA other downstream 4422859 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 4514138 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 887177 15539768 ~ 15554897 (-)
G2109705 NA other upstream 951094 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 1050745 15703333 ~ 15793545 (-)
G2110939 NA other upstream 2146799 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 2603617 17254319 ~ 17260420 (-)

Expression


Co-expression Network