LOC110508615


Basic Information

Item Value
gene id LOC110508615
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14946004 ~ 14949052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508615
ATGGGACTGCTGTCTGACCCAAACCAAAGGCGAGCCCTGACCAACCTTCTCACCTGTTTCAATGCACCAATTTGtcTCGGTCAGATGGTGCATGGCACTAACATTTATGGGATCCTGCGGGCCCCCAGAGCCCCTCATACTGATGCCCTGGTGCTGGGCGCCCCCTGTGGTGAGGGAAACAACGACAACCAGTACTTCAGGAGTCAGATCCACTGGGCTAAGGATACCTTTCTGGTGAATGAACATGACCTGATCGGCATGCAGGCCTGGCTCGAGGGAtaccaccacaccaacaccaATGGTGGTGACTGGTCTCTGCTGCAGGGGAGAGGTGGCTCCATCCAGGAAGCACTGTCTTTGGAGCAGAGCAGTGACATCATCACCAGTCTGCACCTGGTTCTGGAGGGGCTCAATGGACGAGCCAGTAGTAACACGTTTAATTATCCGACTGCCCAGCTACAGAGGAATGACTGGGACAGTACGTTGGGCTACATCCACGCGGCCCAGACCATGATGGTGTTGAAGCAGGCCAGCGGGCGGCCCTGGGGGAACCACGGCCCATTCCTTAGATACCATATAGAGACTGCTACCGTCAGGGGCATCAACACCTTCAGACAGTACAAGACCGACACCACCACCATCGGCAGGCTCCTGAAGGGGATATACCGGAAGCTGAACAACCTCCTGGAGCATCTGCACCAGTCCTACTTCTCATGCCCTCACTCTCTCGCTTTGCCTCCAGTGGTTATTACATGCCCGCCTTCGGCCAGCTGGCTGTCATCATGCTGCTGCATGTGTCTATCGACCTCTGGGACCTTGGGGATTCTAGTTTTATTGaatcattatttaaccaggtagtccaaTTGATGTCAGATTACCTTTTTCCAAAGGGAGACTTGGACAAGAGGGGAGGATGGTTGGAATTGGCCAAGAGGGGAGGATGGGTTGGAATActttctcccctgtcctccagcCCAGGGATCCTGTCTATACTGACTCCAGTAGTGATCAGTCATATGACAGGGGTAGCTCTGTAcaccctccccatcctctctcagcAGATGGCTGTGCAACACTTCCCTGTGTCCGAGACTGAAATTGTGGTCCTCACTGCTATTGTCATCTACACAGCTTATTGTTTTTTGGCACATTCATTTATTTTCCTTTGCAATTTGTATACAGCCACGAAGTGCTGGCGCAAAGGCTTACTCTGATTTGATTGAGGAACAGCAAGCTTGACTGGTTTATAAATGGTGTGGAACTGACTGAATAAAGGTGATCTCATATCCTTTACATTCATAAATCATACAATGTAGTTATGTCTATGATATCACATTGGGACAAGTAAACTAAAGTTCTCATTTGTATTTTTGATATGAAGTCCATCAGGACTTGCTAGACAGTGATGTTAAAGTGATTGACTCATCAGTTGCACACTGGTAGACTTTTTGGCTGTTATCTGCAGGAACAATAGGTAGGCTAGTGGAGCGACACTCTCACACTGGTCCAAAATATGATAAAagaaaatggattgaattgttgTAAAAGCTAATGATACTTCTATGGTATTTTCAAAGATATTGATACAGGTCTACTGATTTAGTCAACATGTTGACAATGGAGTAGTTAACTGCTGCTTTCTGTGTATCAAAGCCCATGATTAATACTTCCTTCATTCTTCAATCATACCTGTAGTGCAGATAGCTAAGAAAATGCCTCTTTAAAAGGAAGCTTGAAGCCTGTTGAAGTCAGCAGACTTACAAGATTCTTAAATTAATCTGTGGGTCAGAtgttaaagtattttttttttttttaataaatgacATACTGCAATTCACAGAGTTGCAAACACGAATTT

Function

NR:

description
glycosylphosphatidylinositol anchor attachment 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508615 True 1858 mRNA 0.46 6 14946004 14949052

Neighbor

gene id symbol gene type direction distance location
exosc4 exos4 coding upstream 667 14943509 ~ 14945337 (+)
LOC110508616 LOC106599750 coding upstream 4374 14928691 ~ 14941630 (+)
LOC110508614 LOC106599757 coding upstream 64124 14774001 ~ 14881880 (+)
LOC110508610 LOC106599772 coding upstream 318550 14626005 ~ 14627454 (+)
LOC110508609 LOC105019392 coding upstream 330616 14608465 ~ 14615388 (+)
LOC110508619 LOC106599747 coding downstream 7830 14955823 ~ 14958873 (+)
LOC110508620 LOC106599743 coding downstream 35740 14984792 ~ 15024992 (+)
LOC118944875 NA coding downstream 402319 15351371 ~ 15352048 (+)
LOC110508625 LOC106599735 coding downstream 570278 15519330 ~ 15540665 (+)
LOC110508628 LOC106599723 coding downstream 844757 15793809 ~ 15801356 (+)
G2108754 NA non-coding upstream 2947 14942839 ~ 14943057 (+)
G2108748 NA non-coding upstream 18270 14927452 ~ 14927734 (+)
G2108733 NA non-coding upstream 32821 14912977 ~ 14913183 (+)
G2108494 NA non-coding upstream 93383 14852400 ~ 14852621 (+)
G2108751 NA non-coding downstream 2688 14951740 ~ 14951918 (+)
G2108762 NA non-coding downstream 20735 14969787 ~ 14970027 (+)
G2108786 NA non-coding downstream 76892 15025944 ~ 15026155 (+)
G2108832 NA non-coding downstream 148971 15098023 ~ 15098809 (+)
G2107033 NA other upstream 1032777 13911427 ~ 13913227 (+)
G2106557 NA other upstream 1802409 13143313 ~ 13143595 (+)
G2106549 NA other upstream 1811519 13133894 ~ 13134485 (+)
G2106548 NA other upstream 1812243 13133399 ~ 13133761 (+)
G2106543 NA other upstream 1818773 13126962 ~ 13127231 (+)
G2109948 NA other downstream 989459 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 999256 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 1499060 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 1863542 16809471 ~ 16813125 (+)
G2111044 NA other downstream 2004732 16953784 ~ 16958852 (+)

Expression


Co-expression Network