Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508619 |
| gene name | LOC106599747 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 14955823 ~ 14958873 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sharpin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002471336.2 | False | 561 | mRNA | 0.42 | 2 | 14956882 | 14958873 |
| TU2411788 | True | 503 | lncRNA | 0.54 | 2 | 14955823 | 14958659 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508615 | NA | coding | upstream | 7830 | 14946004 ~ 14949052 (+) |
| exosc4 | exos4 | coding | upstream | 11545 | 14943509 ~ 14945337 (+) |
| LOC110508616 | LOC106599750 | coding | upstream | 15252 | 14928691 ~ 14941630 (+) |
| LOC110508614 | LOC106599757 | coding | upstream | 75002 | 14774001 ~ 14881880 (+) |
| LOC110508610 | LOC106599772 | coding | upstream | 329428 | 14626005 ~ 14627454 (+) |
| LOC110508620 | LOC106599743 | coding | downstream | 25919 | 14984792 ~ 15024992 (+) |
| LOC118944875 | NA | coding | downstream | 392498 | 15351371 ~ 15352048 (+) |
| LOC110508625 | LOC106599735 | coding | downstream | 560457 | 15519330 ~ 15540665 (+) |
| LOC110508628 | LOC106599723 | coding | downstream | 834936 | 15793809 ~ 15801356 (+) |
| LOC110508629 | LOC106599721 | coding | downstream | 872291 | 15831164 ~ 15896168 (+) |
| G2108751 | NA | non-coding | upstream | 4964 | 14951740 ~ 14951918 (+) |
| G2108754 | NA | non-coding | upstream | 13825 | 14942839 ~ 14943057 (+) |
| G2108748 | NA | non-coding | upstream | 29148 | 14927452 ~ 14927734 (+) |
| G2108733 | NA | non-coding | upstream | 43699 | 14912977 ~ 14913183 (+) |
| G2108762 | NA | non-coding | downstream | 10914 | 14969787 ~ 14970027 (+) |
| G2108786 | NA | non-coding | downstream | 67071 | 15025944 ~ 15026155 (+) |
| G2108832 | NA | non-coding | downstream | 139150 | 15098023 ~ 15098809 (+) |
| G2109189 | NA | non-coding | downstream | 334988 | 15293861 ~ 15294073 (+) |
| G2109208 | NA | non-coding | downstream | 351095 | 15309968 ~ 15310296 (+) |
| G2107033 | NA | other | upstream | 1043655 | 13911427 ~ 13913227 (+) |
| G2106557 | NA | other | upstream | 1813287 | 13143313 ~ 13143595 (+) |
| G2106549 | NA | other | upstream | 1822397 | 13133894 ~ 13134485 (+) |
| G2106548 | NA | other | upstream | 1823121 | 13133399 ~ 13133761 (+) |
| G2106543 | NA | other | upstream | 1829651 | 13126962 ~ 13127231 (+) |
| G2109948 | NA | other | downstream | 979638 | 15938511 ~ 15938857 (+) |
| G2109955 | LOC106599720 | other | downstream | 989435 | 15948308 ~ 15948861 (+) |
| G2110507 | LOC107717027 | other | downstream | 1489239 | 16448112 ~ 16448502 (+) |
| LOC110508278 | LOC106599701 | other | downstream | 1853721 | 16809471 ~ 16813125 (+) |
| G2111044 | NA | other | downstream | 1994911 | 16953784 ~ 16958852 (+) |
