Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944875 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 15351371 ~ 15352048 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005040278.1 | True | 610 | mRNA | 0.50 | 2 | 15351371 | 15352048 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508620 | LOC106599743 | coding | upstream | 326379 | 14984792 ~ 15024992 (+) |
| LOC110508619 | LOC106599747 | coding | upstream | 392498 | 14955823 ~ 14958873 (+) |
| LOC110508615 | NA | coding | upstream | 402319 | 14946004 ~ 14949052 (+) |
| exosc4 | exos4 | coding | upstream | 406034 | 14943509 ~ 14945337 (+) |
| LOC110508616 | LOC106599750 | coding | upstream | 409741 | 14928691 ~ 14941630 (+) |
| LOC110508625 | LOC106599735 | coding | downstream | 167282 | 15519330 ~ 15540665 (+) |
| LOC110508628 | LOC106599723 | coding | downstream | 441761 | 15793809 ~ 15801356 (+) |
| LOC110508629 | LOC106599721 | coding | downstream | 479116 | 15831164 ~ 15896168 (+) |
| LOC110508631 | igfbp-1b2 | coding | downstream | 548607 | 15900655 ~ 15903661 (+) |
| LOC110508635 | LOC106599714 | coding | downstream | 721502 | 16073550 ~ 16132563 (+) |
| G2109236 | NA | non-coding | upstream | 25001 | 15326154 ~ 15326370 (+) |
| G2109208 | NA | non-coding | upstream | 41075 | 15309968 ~ 15310296 (+) |
| G2109189 | NA | non-coding | upstream | 57298 | 15293861 ~ 15294073 (+) |
| G2108832 | NA | non-coding | upstream | 252562 | 15098023 ~ 15098809 (+) |
| G2108786 | NA | non-coding | upstream | 325216 | 15025944 ~ 15026155 (+) |
| G2109321 | NA | non-coding | downstream | 113190 | 15465238 ~ 15465470 (+) |
| G2109300 | NA | non-coding | downstream | 134159 | 15486207 ~ 15488257 (+) |
| G2109345 | NA | non-coding | downstream | 159058 | 15511106 ~ 15511310 (+) |
| G2109346 | NA | non-coding | downstream | 160031 | 15512079 ~ 15512306 (+) |
| G2109347 | NA | non-coding | downstream | 160414 | 15512462 ~ 15512733 (+) |
| G2107033 | NA | other | upstream | 1438144 | 13911427 ~ 13913227 (+) |
| G2106557 | NA | other | upstream | 2207776 | 13143313 ~ 13143595 (+) |
| G2106549 | NA | other | upstream | 2216886 | 13133894 ~ 13134485 (+) |
| G2106548 | NA | other | upstream | 2217610 | 13133399 ~ 13133761 (+) |
| G2106543 | NA | other | upstream | 2224140 | 13126962 ~ 13127231 (+) |
| G2109948 | NA | other | downstream | 586463 | 15938511 ~ 15938857 (+) |
| G2109955 | LOC106599720 | other | downstream | 596260 | 15948308 ~ 15948861 (+) |
| G2110507 | LOC107717027 | other | downstream | 1096064 | 16448112 ~ 16448502 (+) |
| LOC110508278 | LOC106599701 | other | downstream | 1460546 | 16809471 ~ 16813125 (+) |
| G2111044 | NA | other | downstream | 1601736 | 16953784 ~ 16958852 (+) |
